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Map Set Name: Apex/H. spontaneum BC SSR QTL 2003 [ Show Only This Set ]
Abbreviated Name: Apex/H. spontaneum BC SSR QTL [ Download Map Set Data ]
Accession ID: pih2003a [ View Map Set In Matrix ]
Species: Hordeum vulgare (Barley) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 01 January, 2003  
Description: This is the first described advanced-backcross QTL using spring barley as a model, and is the first barley QTL study based exclusively on SSR markers. The mapping population was created from a cross between Hordeum vulgare (Apex) and Hordeum spontaneum (ISR-101-23) followed by 2 cycles of backcrossing with Apex and one cycle of selfing. 136 randomly chosen individuals were used for genotyping and these were subsequently bulk propagated for field testing; BC2F2:5 in 1999, and BC2F2:6 in 2000. 13 quantitative traits were measured in up to 6 environments (3 sites over 2 years), resulting in 86 putative QTLs among 585 marker x trait combinations. SSR markers polymorphic between the parents but failing to show the ISR101-23 allele in the BC2F2 population are assigned an 'Error 1' to their map position resulting in placement on the map in a column to the right of markers with both alleles found in the BC2F2 population. QTLs are in the right-most column on the interactive maps. The marker and map data are kindly provided by GrainGenes.  
Maps:
1H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: Galleon/Haruna nijo RFLP/AFLP/SSR QTL 2003 [ Show Only This Set ]
Abbreviated Name: Galleon/Haruna nijo RFLP/AFLP/ [ Download Map Set Data ]
Accession ID: wik2003a [ View Map Set In Matrix ]
Species: Hordeum vulgare (Barley) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 01 January, 2003  
Description: QTL were identified for adult plant resistance for the spot form of net blotch (Pyrenophora teres f. maculata) on 4H, 5H and 7H in 5 mapping populations. Seedling resistance was mapped to the long arm of 7H. The marker and map data are kindly provided by GrainGenes.  
Maps:
7H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: UMN Fred/Stan QTL 2003 [ Show Only This Set ]
Abbreviated Name: UMN Fred/Stan QTL 2003 [ Download Map Set Data ]
Accession ID: mea2003a [ View Map Set In Matrix ]
Species: Hordeum vulgare (Barley) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 31 January, 2003  
Description: A population of 130 F4:6 recombinant inbred (RI) lines has been developed from the cross between Fredrickson/ Stander. Stander (PI 564743) was developed at the University of Minnesota, and are highly related, six-rowed genotypes that are susceptible to FHB infection. Fredrickson is a two-rowed cultivar from Japan that is moderately resistant to FHB. A total of 143 markers (85 RFLP, 57 SSR, and 1 morphological) have been mapped, providing a genetic map with a total genetic distance of 1170 cM.  
Maps:
1H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: NCSL Zhed/ND//Fos QTL 2003 [ Show Only This Set ]
Abbreviated Name: NCSL Zhed/ND//Fos QTL 2003 [ Download Map Set Data ]
Accession ID: dal2003a [ View Map Set In Matrix ]
Species: Hordeum vulgare (Barley) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 27 May, 2003  
Description: Mapping was done on a '3-way cross. The initial cross was Zhedar 2 by ND9712. To increase adaptation, the F1's were then crossed to Foster. The progeny from this cross were crossed with H.bulbosum resulting in 75 lines of a doubled-haploid Zhedar 2 /ND9712 /Foster population. The map included 123 AFLP, 53 RFLP, 29 SSR and 7 RGA markers plus the Rpg1 locus for stem rust resistance and the vrs1 locus for spike morphology. The total map distance was 1,330.8 cM, with an average two-locus interval of 6.2 cM.  
Maps:
1H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: Steptoe/Morex DH RFLP QTL 2006 [ Show Only This Set ]
Abbreviated Name: Steptoe/Morex DH RFLP QTL 2006 [ Download Map Set Data ]
Accession ID: blt2006a [ View Map Set In Matrix ]
Species: Hordeum vulgare (Barley) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 01 January, 2006  
Description: Feed quality QTL mapped on the Steptoe x Morex DH population. Genotyping data: Steptoe = A; Morex = B. At the time of map curation, the publication was still in preparation. The marker and map data are kindly provided by GrainGenes.  
Maps:
1H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: JIC Igr/Tri QTL 1995 [ Show Only This Set ]
Abbreviated Name: JIC Igr/Tri QTL 1995 [ Download Map Set Data ]
Accession ID: lad1995a [ View Map Set In Matrix ]
Species: Hordeum vulgare (Barley) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 31 December, 1995  
Description: A population consisting of 94 doubled haploid (DH) lines was developed from a cross between Igri/Triumph. Igri is a winter barley variety, whereas Triumph is a spring cultivar. The map consists of 92 RFLP loci and two storage protein loci. The marker and map data are kindly provided by GrainGenes.  
Maps:
1H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: Tadmor/Er Apm RI RFLP/AFLP/SSR QTL 1998 [ Show Only This Set ]
Abbreviated Name: Tadmor/Er Apm RI RFLP/AFLP/SSR [ Download Map Set Data ]
Accession ID: teb1998a [ View Map Set In Matrix ]
Species: Hordeum vulgare (Barley) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 01 January, 1998  
Description: 167 recombinant inbred lines (RIL) derived from a cross between Tadmor (drought tolerant) and Er/Apm (susceptible) was used. Tadmor, a two-row variety selected from a Syrian landrace, is characterized by high yield stability (Grando 1989) and a high osmotic adjustment capacity (Teulat et al. 1997). Er/Apm, a two-row variety adapted to moderate rainfall conditions (Acevedo 1987), was developed by ICARDA (International Center for Agricultural Research in the Dry Areas, Syria), Recombinant inbred lines were advanced by bulk until the F4 generation at ICARDA and then by single-seed descent until the F8 generation at CIMMYT (Mexico). Linkage analysis and map construction were performed by using Map Manager QTX14 (Manly and Cudmore 1997) using the Haldane function (Haldane 1919) to convert the recombination frequencies to centiMorgans (cM). Acknowledgments: Most of the mapping was done in ENSAM-INRA Montpellier (France) by Beatrice Teulat with technical help from Christiane Borries, under scientific supervision of Dominique This. This work was funded by several grants from INRA France and the French Ministry of Agriculture, and a grant from the EC INCO-DC international cooperation with developing countries program. Contributions to the RFLP data were made by Mireille Khairallah (CIMMYT, Mexico) and Philippe Leroy (INRA, Clermont-Ferrand, France). Ayman Diab and Mark Sorrells (Cornell U., USA) added 33 markers corresponding to candidate genes and ESTs and performed the final map construction. The marker and map data are kindly provided by GrainGenes.  
Maps:
1H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: OSU Har/Mor QTL 2000 [ Show Only This Set ]
Abbreviated Name: OSU Har/Mor QTL 2000 [ Download Map Set Data ]
Accession ID: mac2000a [ View Map Set In Matrix ]
Species: Hordeum vulgare (Barley) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 31 July, 2000  
Description: One hundred and forty double-haploid (DH) lines were produced from the F1 of Harrington x Morex by the H. bulbosum method. One hundred and six markers were used for construction of a base map, with a target density of 10 cM. The marker and map data are kindly provided by GrainGenes.  
Maps:
1H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7H [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: UM B100/A10 QTL 2004 [ Show Only This Set ]
Abbreviated Name: UM B100/A10 QTL 2004 [ Download Map Set Data ]
Accession ID: doa2004a [ View Map Set In Matrix ]
Species: Setaria italica (Foxtail millet) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 15 June, 2004  
Description: A genetic map of a cross between foxtail millet (Setaria italica acc. B100) and green millet (S. viridis acc. A10) using restriction fragment length polymorphism (RFLP) markers was originally constructed at the John Innes Centre. The original molecular map used 160 RFLP probes, consisting of anonymous foxtail millet, pearl millet, and wheat genomic clones, and two known function clones identifying the waxy and carboxypeptidase loci. Additional rice probes were added to investigate the synteny of foxtail millet with rice, giving a map containing 257 loci and spanning 1,050 cM. The marker and map data for this population were kindly provided by Dr. Andrew Doust.  
Maps:
I [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
II [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
III [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
IV [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
V [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
VI [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
VII [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
VIII [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
IX [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: MISCU H123/AG19 BC1 QTL 2003 [ Show Only This Set ]
Abbreviated Name: MISCU H123/AG19 BC1 QTL 2003 [ Download Map Set Data ]
Accession ID: luh2003a [ View Map Set In Matrix ]
Species: Zea mays (Maize) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 28 February, 2003  
Description: This map is based on a BC1S1 population derived from a cross between H123 and AG19. AG19 is a Supergold popcorn inbred developed by Ag Alumni Seed Improvement Association, Incorporated, whereas H123 is a dent corn inbred developed at Purdue University from the [B73(B73 X 84)] BC1 cross. The F1 was backcrossed to AG19 and the BC1 plants were selfed to generate BC1S1 lines. The map includes 80 SSR markers assigned to 18 linkage groups that comprised 963 cM.  
Maps:
1a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
1b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
1c [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
9a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
9b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: Maize Bins QTL 2005 [ Show Only This Set ]
Abbreviated Name: Maize Bins QTL 2005 [ Download Map Set Data ]
Accession ID: maize-bins-qtl [ View Map Set In Matrix ]
Species: Zea mays (Maize) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 11 August, 2005  
Description: Bins are segments of approximately 20 cM delimited by two fixed Core Markers (Gardiner et al., 1993). These bins are designated by a chromosome number followed by a two-digit decimal (e.g., 1.00, 1.01, 1.02, etc). The bin is an interval that includes all loci from the leftmost or top Core Marker to the next Core Marker. Placement of a locus to a bin is dependent on the precision of mapping data, and increases in certainty as markers increase in number or populations increase in size. On the Gramene version of this map, the position of each core marker is based on the Maize UMC 1998 map.

The Maize Bins QTL map displays all maize QTLs imported from Maize GDB. Those QTLs were originally curated in Maize GDB with minor modifications according Gramene SOPs. We acknowledge Carolyn Lawrence, Mary Polacco, Trent Seigfried, and Darwin Campbell in MaizeGDB for their collaboration and sharing of data.

 
Maps:
1 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
9 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: NCSU B73/Mo17 QTL 1992 [ Show Only This Set ]
Abbreviated Name: NCSU B73/Mo17 QTL 1992 [ Download Map Set Data ]
Accession ID: stc1992a [ View Map Set In Matrix ]
Species: Zea mays (Maize) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 30 November, 1992  
Description: This map is based on an F3 population derived from a cross between two elite maize inbred lines, B73 and Mo17. This cross produces superior hybrid performance and the parental lines, or lines derived from them, have been and are still used in commercial hybrids. Approximately 10 F4 plants were bulked and used to infer the genotype of the F3 parents. The map includes 9 isozyme loci and 67 RFLP loci.  
Maps:
1 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
9 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10c [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: UWM B73/Mo17 RFLP SSR QTL 1996 [ Show Only This Set ]
Abbreviated Name: UWM B73/Mo17 QTL 1996 [ Download Map Set Data ]
Accession ID: sem1996a [ View Map Set In Matrix ]
Species: Zea mays (Maize) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 01 January, 1996  
Description: Recombinant inbred lines (RILs) from the cross B73 X Mo17 were increased at the University of Wisconsin, Madison, USA, and were originally supplied by Charles Stuber and Lynn Senior at North Carolina State University. Mo17 is a phosphorus efficient genotype, and B73 is a phosphorus inefficient genotype. A total of 162 RILs were analyzed in this study.

The RIL population was previously genotyped with 196 RFLP, SSR, and isozyme markers. This genetic linkage map has 27 markers on chromosome 1, 14 on chromosome 2, 15 on chromosome 3, 23 on chromosome 4, 32 on chromosome 5, 21 on chromosome 6, 13 on chromosome 7, 17 on chromosome 8, 18 on chromosome 9, and 16 on chromosome 10. The map covers 1,703 cM with an average interval of 8.73 cM.

 
Maps:
1 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
9 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: INRA Io/F2 Composite QTL 1996 [ Show Only This Set ]
Abbreviated Name: INRA Io/F2 Composite QTL 1996 [ Download Map Set Data ]
Accession ID: cam1996a [ View Map Set In Matrix ]
Species: Zea mays (Maize) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 31 March, 1996  
Description: This maize genetic map was mainly based on expressed sequences, and it incorporates data from four segregating populations. The final integrated map included 275 loci and covered 1765 cM. Three recombinant inbred line populations were derived from the nonreciprocal crosses between three inbred lines. Among three inbred lines, F2 is a French early flint line, F252 is an American early dent line, and Io is a line from the Iodent group. The first RI population was derived from the cross between Io and F2, and has 145 RI lines. The second was derived from the cross between F252 and F2, with 129 RI line. The third was derived from the cross between Io and F252, with 152 RI lines. Another F2 population derived from the cross between Io and F2 with 95 individuals was also used to generate the composite map.  
Maps:
1 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
9 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Cross-references:  
 
Map Set Name: Iowa Mo17/H99 RI QTL 1996 [ Show Only This Set ]
Abbreviated Name: Iowa Mo17/H99 RI QTL 1996 [ Download Map Set Data ]
Accession ID: aud1996a [ View Map Set In Matrix ]
Species: Zea mays (Maize) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 31 May, 1996  
Description: This maize mapping population consisted of 186 recombinant inbred lines derived from the cross between two inbred lines Mo17 and H99. A linkage map contained 101 loci detected by 93 RFLP probes and 1 genetic marker for cob color (P1), and spanned 1408 cM with a mean density of 15.4 cM.  
Maps:
1 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
9 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: CIMMYT Ac7729/Ac7643S QTL 1996 [ Show Only This Set ]
Abbreviated Name: CIMMYT Ac7729/Ac7643S QTL 1996 [ Download Map Set Data ]
Accession ID: rij1996a [ View Map Set In Matrix ]
Species: Zea mays (Maize) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 27 June, 1996  
Description: This maize mapping population consisted of 234 F2 individuals derived from the cross between Ac7643S5 and Ac7729/TZSRWS5. The two maize inbreds used as parental lines were tropical S5 lines derived from Tuxpeno germplasm. P1, Ac7643S5, was derived from Population 43 (La Posta) and P2, Ac7729/TZSRWS5 from Population 29 (Tuxpeno Caribe). Compared to P2, P1 yields well under drought and has a short ASI (anthesis-sinking interval), while P2 is low yielding under drought and has a long ASI. A linkage map contained 142 loci and spanned 1760 cM with a mean density of 12.5 cM.  
Maps:
1 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
9 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: Bologna Os420/Iab78 QTL 1998 [ Show Only This Set ]
Abbreviated Name: Bologna Os420/Iab78 QTL 1998 [ Download Map Set Data ]
Accession ID: tur1998a [ View Map Set In Matrix ]
Species: Zea mays (Maize) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 22 April, 1998  
Description: The maize genetic map was constructed using 80 F3:4 families derived from a cross between Os420 and IABO78, scored with 106 RFLP maker loci. The critical LOD score for the test of independence of pairs of markers was set at 3.0.  
Maps:
1 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
9 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: Cornell Kan/Ogl QTL 1995 [ Show Only This Set ]
Abbreviated Name: Cornell Kan/Ogl QTL 1995 [ Download Map Set Data ]
Accession ID: odl1995a [ View Map Set In Matrix ]
Species: Avena sativa (Oat) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 31 December, 1995  
Description: A population consisting of 150 F6 recombinant inbred (RI) lines was developed by the single-seed descent method from a cross of Kanota/Ogle. The map consists of 561 RFLP markers with 38 linkage groups, covering approximately 50% of the hexaploid oat genome. The distance between mapped RFLP markers ranged from 0.4 to 23.9 cM with an average of 5.9 cM. The marker and map data are kindly provided by GrainGenes.  
Maps:
1 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
9 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
11 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
12 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
13 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
14 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
15 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
16 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
17 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
18 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
19 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
20 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
21 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
22 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
23 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
24 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
25 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
26 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
27 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
28 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
29 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
30 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
31 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
32 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
33 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
34 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
36 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
37 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: HNAES MIL23/Aki RI QTL 2001 [ Show Only This Set ]
Abbreviated Name: HNAES MIL23/Aki RI QTL 2001 [ Download Map Set Data ]
Accession ID: yat2001a [ View Map Set In Matrix ]
Species: Oryza sativa (Oryza sativa) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 31 December, 2001  
Description: A recombinant inbred line (RIL) H8 from a RIL population consisting of 191 lines was derived from the cross of Milyang23/Akihikari. Milyang23, which is an indica semi-dwarf Korean cultivar, was often used in Japan as the parental strain for the breeding of high yielding rice cultivar. Akihikari is a japonica cultivar with a large number of panicles per plant and a relatively high yield. The genotypes of 74 individual rice plants with 7 heterozygous regions including short arm of chr-1 were determined using 41 RFLP markers. Nine of 11 dominant markers were found to be homozygous. Therefore 30 co-dominant and 2 dominant markers were used to construct an RFLP map.

 
Maps:
1 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: Aberdeen Bala/Azu QTL 2002 [ Show Only This Set ]
Abbreviated Name: Aberdeen Bala/Azu QTL 2002 [ Download Map Set Data ]
Accession ID: pra2002a [ View Map Set In Matrix ]
Species: Oryza sativa (Oryza sativa) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 31 January, 2002  
Description: An F6 recombinant inbred population consisting of 205 lines was developed by the single-seed descent method from a cross between Bala/Azucena. A linkage map contained 101 RFLP and 34 AFLP markers and total map distance was 1680 cM. The map has been updated based on recent data from the same lab. The marker and map data for this population are kindly provided by Dr. A. H. Price.  
Maps:
1 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
9 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
11 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
12a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
12b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: TTU IR58821/IR52561 QTL 2002 [ Show Only This Set ]
Abbreviated Name: TTU IR58821/IR52561 QTL 2002 [ Download Map Set Data ]
Accession ID: kaa2002b [ View Map Set In Matrix ]
Species: Oryza sativa (Oryza sativa) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 22 February, 2002  
Description: A subset of 166 RILs, chosen randomly from a population of 475 lines derived from a cross between two advanced breeding lines, IR58821-23-B-1-2-1 and IR52561-UBN-1-1-2, was used as the mapping population. The RILs were developed by single-seed descent to the F7 generation at IRRI. Both parentals were indica types. A total of 399 markers (96 RFLP and 303 AFLP) were mapped at an average distance of 5 cM between markers. The total map distance was 2022 cM with a LOD threshold of 3.0.  
Maps:
1 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
9 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
11 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
12a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
12b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: TKU Integrated QTL 2002 [ Show Only This Set ]
Abbreviated Name: TKU Integrated QTL 2002 [ Download Map Set Data ]
Accession ID: tot2002a [ View Map Set In Matrix ]
Species: Oryza sativa (Oryza sativa) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 28 February, 2002  
Description: This integrated genetic map was obtained using JoinMap software version 2.0, based on three separate populations and maps. The final integrated map included 298 markers: 96 RFLPs, 166 SSLPs, seven SSCPs, 16 AFLPs, one STS, seven RGAs, two RAPDs, two BAC ends and one YAC end, with an average distance of 4.9 cM between markers.

For three mapping populations, the first was the F1-derived doubled haploid lines (DHLs) from a cross between IR49830-7-1-2-2 [IR49830; a submergence-tolerant breeding line] and CT6241-17-1-5-1 [CT6241; a submergence intolerant line]. This population consists of 65 DHLs and was developed using an anther culture method. The second population, derived from the cross between FR13A (an Indian land race cultivar and one of the most submergence-tolerant lines) and CT6241, consists of 172 recombinant inbred lines (RILs). This population was developed via single seed descent (SSD) at IRRI. The third population consists of 188 F2 plants developed from a cross between Jao Hom Nin (a black rice with moderate tolerance to submergence) and Khaow Dawk Mali 105 (KDML105; an aromatic traditional cultivar from Thailand but that is intolerant of submergence).

A 1235 cM-linkage map of the DHLs was constructed using 105 markers including 72 RFLPs, 13 SSLPs, two randon amplified polymorphic DNAs (RAPDs) and 18 AFLPs. The RIL linkage map was constructed using 183 markers including 46 RFLPs, 128 SSLPs, four single stranded conformation polymorphisms (SSCPs), one AFLP, one sequence tag site (STS), two bacterial artificial chromosome (BAC) ends, and one yeast artificial chromosome (YAC) end. The F2 linkage map consisted of 111 markers including 99 SSLPs, two SSCPs, three STSs and seven resistance gene analogue polymorphisms (RGAPs).

 
Maps:
1 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
9 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
11 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
12 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Cross-references:  
 
Map Set Name: JNARC Noe29/Chu32 F3 QTL 2002 [ Show Only This Set ]
Abbreviated Name: JNARC Noe29/Chu32 F3 QTL 2002 [ Download Map Set Data ]
Accession ID: zek2002a [ View Map Set In Matrix ]
Species: Oryza sativa (Oryza sativa) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 31 March, 2002  
Description: A F3 population consisting of 149 lines was derived from the cross Norin29/Chubu32. A linkage map consisting of 36 RFLP markers was constructed and covered 327 cM on six chromosomes.  
Maps:
4a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6a [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6b [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
11 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: Brazil BG90-2/RS16 QTL 2002 [ Show Only This Set ]
Abbreviated Name: Brazil BG90-2/RS16 QTL 2002 [ Download Map Set Data ]
Accession ID: brc2002a [ View Map Set In Matrix ]
Species: Oryza sativa (Oryza sativa) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 31 May, 2002  
Description: This map is based on a cross between O. sativa cv. BG90-2 and the wild species, O. glumaepatula RS-16. A single plant of O. glumaepatula RS-16, selected from a highly inbred population of wild rice collected from the Amazon region, was used as a female parent in crosses with the high yielding elite inbred line O. sativa BG90-2. Four F1 plants were backcrossed to BG90-2 used as female parent. Based on their phenotypic similarity to BG90-2, 256 BC1F1 plants were selected and backcrossed to BG90-2, used again as the female progenitor. Ninety six BC2F1 progenies were selected at random and used for genotyping. The map totally has 157 markers, including 150 SSR and 7 STS markers.  
Maps:
1 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
11 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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Map Set Name: JNIG W1944/Peik QTL 2002 [ Show Only This Set ]
Abbreviated Name: JNIG W1944/Peik QTL 2002 [ Download Map Set Data ]
Accession ID: cah2002a [ View Map Set In Matrix ]
Species: Oryza sativa (Oryza sativa) [ View Species Info ]
Map Type: QTL [ View Map Type Info ]
Map Units: cM  
Published On: 30 June, 2002  
Description: This map is based on a cross between O. sativa cv. Pei-kuh and the wild species, O. rufipogon Griff.(W1944). A set of 125 F6 recombinant inbred lines (RILs) was used for genotyping. The map totally has 147 markers, including 121 RFLP markers, 17 isozymes, two protein markers, one RAPD marker and 6 qualitatively recognizable traits. The marker and map data for this population are kindly provided by Dr. H. W. Cai.  
Maps:
1 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
2 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
3 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
4 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
5 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
6 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
7 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
8 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
9 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
10 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
11 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
12 [ Map Viewer ] [ Map Details ] [ Matrix Viewer ] [ Download Map Data ]
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