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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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Map Set Oat-Cornell Kan/Ogl QTL 1995
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Map Details

Map Type: QTL [ View Map Type Info ]
Map Set Name: Oat - Cornell Kan/Ogl QTL 1995 [ View Map Set Info ]
Map Name: 11
Map Start: -1.3 cM
Map Stop: 23.9 cM
Features by Type:
8 QTL
5 RFLP
13 Total

Map Features

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Items 1 to 13 of 13.
Oat - Cornell Kan/Ogl QTL 1995 - 11
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Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Xcdo1281 RFLP 10.3 Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 7 CDO1281 RFLP 26,341,841 - 26,342,679 (bp) Marker Identity View Maps
Wheat - Composite 2004 - 2A Xcdo1281b RFLP 30 (cM) Marker Identity View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 7 CDO1281 RFLP 76.15 (cM) Marker Identity View Maps
Oat - Cornell Diploid 1995 - G CDO1281 RFLP 51.2 (cM) Marker Identity View Maps
Wheat - Cornell Synthetic/Opata 1995 - 2A Xcdo1281-2A RFLP 117.7 (cM) Marker Identity View Maps
Oat - Oat, KxO, 2003 - 11_41+20 CDO1281 RFLP 8.16 (cM) Marker Identity View Maps
Wheat - Composite 2004 - 2A Xcdo1281a RFLP 59 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 2A Xcdo1281b RFLP 30 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 2A Xcdo1281a RFLP 59 (cM) Marker Identity View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 2A Xcdo1281-2A RFLP 117.7 (cM) Marker Identity View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 1994 - 7 CDO1281 RFLP 128.6 (cM) Marker Identity View Maps
Xcdo1436C RFLP 6.7 Oat - Oat, KxO, 2003 - 11_41+20 cdo1436c RFLP 10.1 (cM) Marker Identity View Maps
Oat - Cornell Diploid 1995 - G CDO1436 RFLP 45.9 (cM) Marker Identity View Maps
Oat - Oat, KxO, 2003 - 21+46_31+40 cdo1436a RFLP 109 (cM) Marker Identity View Maps
Oat - Oat, KxO, 2003 - 8 cdo1436b RFLP 27.8 (cM) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 7 CDO1436 RFLP 25,036,287 - 25,036,402 (bp) Marker Identity View Maps
Xcdo1464 RFLP 0 Oat - Oat, KxO, 2003 - 11_41+20 CDO1464 RFLP 16.8 (cM) Marker Identity View Maps
Xbcd1270 RFLP 17.3 Oat - Oat, KxO, 2003 - 11_41+20 BCD1270 RFLP 7.23 (cM) Marker Identity View Maps
Xisu2287 RFLP 23.3 Oat - Oat, KxO, 2003 - 11_41+20 isu2287a RFLP 4.14 (cM) Marker Identity View Maps
AQDF010 QTL 21.1 - 23.9 Oat - Oat, KxO, 2003 - 11_41+20 isu2287a RFLP 4.14 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 BCD1270 RFLP 7.23 (cM) qtl_marker View Maps
AQDF013 QTL 5.8 - 10.3 Oat - Oat, KxO, 2003 - 11_41+20 cdo1436c RFLP 10.1 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 7 CDO1281 RFLP 26,341,841 - 26,342,679 (bp) qtl_marker View Maps
Wheat - Composite 2004 - 2A Xcdo1281b RFLP 30 (cM) qtl_marker View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 7 CDO1281 RFLP 76.15 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - G CDO1281 RFLP 51.2 (cM) qtl_marker View Maps
Wheat - Cornell Synthetic/Opata 1995 - 2A Xcdo1281-2A RFLP 117.7 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 CDO1464 RFLP 16.8 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 CDO1281 RFLP 8.16 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - G CDO1436 RFLP 45.9 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 21+46_31+40 cdo1436a RFLP 109 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 BCD1270 RFLP 7.23 (cM) qtl_marker View Maps
Wheat - Composite 2004 - 2A Xcdo1281a RFLP 59 (cM) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 2A Xcdo1281b RFLP 30 (cM) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 2A Xcdo1281a RFLP 59 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 8 cdo1436b RFLP 27.8 (cM) qtl_marker View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 2A Xcdo1281-2A RFLP 117.7 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 7 CDO1436 RFLP 25,036,287 - 25,036,402 (bp) qtl_marker View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 1994 - 7 CDO1281 RFLP 128.6 (cM) qtl_marker View Maps
AQDF016 QTL -1.3 - 2.1 Oat - Oat, KxO, 2003 - 11_41+20 cdo1436c RFLP 10.1 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 CDO1464 RFLP 16.8 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - G CDO1436 RFLP 45.9 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 21+46_31+40 cdo1436a RFLP 109 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 8 cdo1436b RFLP 27.8 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 7 CDO1436 RFLP 25,036,287 - 25,036,402 (bp) qtl_marker View Maps
AQDF009 QTL 16.7 - 23.9 Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 7 CDO1281 RFLP 26,341,841 - 26,342,679 (bp) qtl_marker View Maps
Wheat - Composite 2004 - 2A Xcdo1281b RFLP 30 (cM) qtl_marker View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 7 CDO1281 RFLP 76.15 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - G CDO1281 RFLP 51.2 (cM) qtl_marker View Maps
Wheat - Cornell Synthetic/Opata 1995 - 2A Xcdo1281-2A RFLP 117.7 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 CDO1281 RFLP 8.16 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 isu2287a RFLP 4.14 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 BCD1270 RFLP 7.23 (cM) qtl_marker View Maps
Wheat - Composite 2004 - 2A Xcdo1281a RFLP 59 (cM) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 2A Xcdo1281b RFLP 30 (cM) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 2A Xcdo1281a RFLP 59 (cM) qtl_marker View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 2A Xcdo1281-2A RFLP 117.7 (cM) qtl_marker View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 1994 - 7 CDO1281 RFLP 128.6 (cM) qtl_marker View Maps
AQDF011 QTL 16.7 - 19.7 Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 7 CDO1281 RFLP 26,341,841 - 26,342,679 (bp) qtl_marker View Maps
Wheat - Composite 2004 - 2A Xcdo1281b RFLP 30 (cM) qtl_marker View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 7 CDO1281 RFLP 76.15 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - G CDO1281 RFLP 51.2 (cM) qtl_marker View Maps
Wheat - Cornell Synthetic/Opata 1995 - 2A Xcdo1281-2A RFLP 117.7 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 CDO1281 RFLP 8.16 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 isu2287a RFLP 4.14 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 BCD1270 RFLP 7.23 (cM) qtl_marker View Maps
Wheat - Composite 2004 - 2A Xcdo1281a RFLP 59 (cM) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 2A Xcdo1281b RFLP 30 (cM) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 2A Xcdo1281a RFLP 59 (cM) qtl_marker View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 2A Xcdo1281-2A RFLP 117.7 (cM) qtl_marker View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 1994 - 7 CDO1281 RFLP 128.6 (cM) qtl_marker View Maps
AQDF012 QTL 21.1 - 23.9 Oat - Oat, KxO, 2003 - 11_41+20 isu2287a RFLP 4.14 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 BCD1270 RFLP 7.23 (cM) qtl_marker View Maps
AQDF014 QTL 21.1 - 23.9 Oat - Oat, KxO, 2003 - 11_41+20 isu2287a RFLP 4.14 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 BCD1270 RFLP 7.23 (cM) qtl_marker View Maps
AQDF015 QTL 5.8 - 10.3 Oat - Oat, KxO, 2003 - 11_41+20 cdo1436c RFLP 10.1 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 7 CDO1281 RFLP 26,341,841 - 26,342,679 (bp) qtl_marker View Maps
Wheat - Composite 2004 - 2A Xcdo1281b RFLP 30 (cM) qtl_marker View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 7 CDO1281 RFLP 76.15 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - G CDO1281 RFLP 51.2 (cM) qtl_marker View Maps
Wheat - Cornell Synthetic/Opata 1995 - 2A Xcdo1281-2A RFLP 117.7 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 CDO1464 RFLP 16.8 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 CDO1281 RFLP 8.16 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - G CDO1436 RFLP 45.9 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 21+46_31+40 cdo1436a RFLP 109 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 11_41+20 BCD1270 RFLP 7.23 (cM) qtl_marker View Maps
Wheat - Composite 2004 - 2A Xcdo1281a RFLP 59 (cM) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 2A Xcdo1281b RFLP 30 (cM) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 2A Xcdo1281a RFLP 59 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 8 cdo1436b RFLP 27.8 (cM) qtl_marker View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 2A Xcdo1281-2A RFLP 117.7 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 7 CDO1436 RFLP 25,036,287 - 25,036,402 (bp) qtl_marker View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 1994 - 7 CDO1281 RFLP 128.6 (cM) qtl_marker View Maps