Current Release JGI v1.1

Assembly

Browse Populus trichocarpa This release is based on a whole genome shotgun assembly of Populus trichocarpa with approximately 7.5x coverage. For more information, go to the JGI website. Further details may also be found at Phytozome.


Annotation

  • Various plant nucleotide sequences have been mapped to the genome, the mapped features can be viewed in contigview

Entry Points

Lookup a Scaffold

Scaffold from -

Example Features

   Gene: fgenesh4_pg.C_LG_I000005
    Transcript: fgenesh4_pg.C_LG_I000005

Statistics

Assembly: jgi2004,
Genebuild: JGI1.1, Dec 2004
Database version: 49.jgi2004
Gene exons: 41,908
Gene transcripts: 9,879
Base Pairs: 485,510,911
Golden Path Length: 485,510,911

How the statistics are calculated