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Feature Type Info

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Feature Type: AFLP
Accession ID: aflp
Color: mediumseagreen
Shape: line
Description: Amplified Fragment Length Polymorphism
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Feature Type: Breakpoint Interval
Accession ID: breakpoint-interval
Color: deepskyblue
Shape: dumbbell
Description: Interval between chromosomal breakpoints on a deletion (physical) map.
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Feature Type: Centromere
Accession ID: centromere
Color: grey
Shape: box
Description: Centromere
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Feature Type: Chromosomal Segment
Accession ID: chromosomal-segment
Color: lightbrown
Shape: box
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Feature Type: Clone
Accession ID: clone
Color: black
Shape: span
Description: As used in the Gramene database, denotes any large-scale genomic clone including bacterial artificial chromosomes (BAC) and P1 artificial chromosomes (PAC).
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Feature Type: Collinear block
Accession ID: collinear_block
Color: blue
Shape: span
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Feature Type: Cytological Structure
Accession ID: cytological-structure
Color: blue
Shape: line
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Feature Type: DArT
Accession ID: dart
Color: gold
Shape: line
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Feature Type: Deletion
Accession ID: deletion
Color: black
Shape: line
Description: Deletion
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Feature Type: EST
Accession ID: est
Color: deepskyblue
Shape: dumbbell
Description: Expressed Sequence Tag
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Feature Type: EST Cluster
Accession ID: est-cluster
Color: black
Shape: line
Description: Entities formed by clustering datasets of EST and/or mRNA sequences, e.g. NCBI UniGenes, TIGR GIs
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Feature Type: FISH probe
Accession ID: fish-probe
Color: magenta
Shape: line
Description: Labeled probe used for fluorescent in situ hybridization
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Feature Type: FPC
Accession ID: fpc
Color: mediumseagreen
Shape: dumbbell
Description: FingerPrint Contig; sets of overlapping fingerprint clones used in physical mapping
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Feature Type: Gene
Accession ID: gene
Color: mediumseagreen
Shape: dumbbell
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Feature Type: Gene candidate
Accession ID: gene-candidate
Color: blue
Shape: line
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Feature Type: Gene family
Accession ID: gene-family
Color: blue
Shape: line
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Feature Type: Gene Prediction
Accession ID: gene-prediction
Color: mediumseagreen
Shape: dumbbell
Description: Denotes the computationally-determined location of a transcription unit in the genome. These are verified using experimental evidence provided by EST and full-length cDNA sequences.
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Feature Type: Gene Primer
Accession ID: gene-primer
Color: mediumseagreen
Shape: dumbbell
Description: A pair of primers that amplify coding sequence of a gene. Often designed to specifically amplify only a particular allele.
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Feature Type: Genomic DNA
Accession ID: genomic-dna
Color: black
Shape: line
Description: Genomic DNA
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Feature Type: GSS
Accession ID: gss
Color: black
Shape: line
Description: Genome Survey Sequences
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Feature Type: Insertion
Accession ID: insertion
Color: black
Shape: line
Description: Insertion
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Feature Type: ISBP
Accession ID: isbp
Color: blue
Shape: line
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Feature Type: Lapsed locus
Accession ID: lapsed-locus
Color: blue
Shape: line
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Feature Type: Maize Bin
Accession ID: maize-bin
Color: crimson
Shape: banding
Description: The maize genome has been divided into bins of approximately 20 cM. Each maize bin is delimited by two fixed core markers, one each end of the bin. The bin includes all loci (features) from the left- or topmost core marker to the next core marker.
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Feature Type: Marker
Accession ID: marker
Color: black
Shape: line
Description: Generic marker type for any feature that has been genetically mapped. Used when the specific marker type (e.g., RFLP, SSR) is unknown.
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