grain_iconCMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Cornell Kan/Ogl QTL 1995
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 34
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
QTL
RFLP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: QTL [ View Map Type Info ]
Map Set Name: Oat - Cornell Kan/Ogl QTL 1995 [ View Map Set Info ]
Map Name: 34
Map Start: -1 cM
Map Stop: 11.1 cM
Features by Type:
2 QTL
4 RFLP
6 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 6 of 6.
Oat - Cornell Kan/Ogl QTL 1995 - 34
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Xumn41 RFLP 10.1 Maize - IBM2 2008 Neighbors - 3 umn41 Probed site 358.3 (cM) maizegdb_to_gramene View Maps
Maize - Maize Bins QTL 2005 - 3 Bin 3.05 Maize Bin 67.9 - 87 (cM) Maize bin marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 UMN41 RFLP 39,949,957 - 39,950,239 (bp) Marker Identity View Maps
Maize - Bins - 3 Bin 3.05 Maize Bin 67.9 - 87 (bins) Maize bin marker View Maps
Maize - UMC 1998 - 3 UMN41 RFLP 81.9 (cM) Marker Identity View Maps
Oat - Oat, KxO, 2003 - 24_26_34 UMN41 RFLP 10 (cM) Marker Identity View Maps
Xbcd1555 RFLP 6.7 Wheat - Wheat composite QTL 2004 - 3A Xbcd15.1 RFLP 26 (cM) Marker Identity View Maps
Wheat - IWGSC Physical 3B - 3B Xbcd1555-3B RFLP 185,313,743 (bp) Marker Identity View Maps
Oat - Oat, KxO, 2003 - 24_26_34 BCD1555 RFLP 9.99 (cM) Marker Identity View Maps
Barley - Barley consensus 2003 - 7H BCD15c RFLP 16.7 (cM) Marker Identity View Maps
Wheat - Cornell Synthetic/Opata 1995 - 4D Xbcd15-4D RFLP 70.5 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 3A Xbcd15.1 RFLP 74 (cM) Marker Identity View Maps
Wheat - Cheyenne/Wichita RI RFLP QTL 1 - 3A AQGU006 QTL 84.1 - 90.1 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 BCD1555 RFLP 39,565,643 - 39,566,233 (bp) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 3B Xbcd1555 RFLP 63 (cM) Marker Identity View Maps
Wheat - Cornell Synthetic/Opata 1995 - 3D Xbcd1555-3D RFLP 115.6 (cM) Marker Identity View Maps
Wheat - Wheat composite QTL 2004 - 3D Xbcd1555a RFLP 93 (cM) Marker Identity View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 3B Xbcd1555-3B RFLP 140.6 (cM) Marker Identity View Maps
Wheat - Composite 2004 - 4D Xbcd15.1 RFLP 74 (cM) Marker Identity View Maps
Wheat - Composite 2004 - 3B Xbcd1555 RFLP 63 (cM) Marker Identity View Maps
Barley - Barley consensus - 1995 - 1H BCD15 RFLP 58.1 (cM) Marker Identity View Maps
Barley - Barley consensus 2003 - 6H BCD15b RFLP 116.9 (cM) Marker Identity View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 4D Xbcd15-4D RFLP 70.5 (cM) Marker Identity View Maps
Wheat - Composite 2004 - 3D Xbcd1555a RFLP 93 (cM) Marker Identity View Maps
Oat - Cornell Diploid 1995 - A BCD15 RFLP 23.5 (cM) Marker Identity View Maps
Wheat - Cornell Synthetic/Opata 1995 - 3B Xbcd1555-3B RFLP 140.6 (cM) Marker Identity View Maps
Wheat - Cornell Synthetic/Opata 1995 - 3A Xbcd15-3A RFLP 5.1 (cM) Marker Identity View Maps
Wheat - Composite 2004 - 3A Xbcd15.1 RFLP 26 (cM) Marker Identity View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 3A Xbcd15-3A RFLP 5.1 (cM) Marker Identity View Maps
Wheat - Cheyenne/Wichita RI RFLP QTL 1 - 3A AQGU007 QTL 84.1 - 90.1 (cM) qtl_marker View Maps
Barley - Barley consensus 2003 - 4H BCD15a RFLP 57.5 (cM) Marker Identity View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 3D Xbcd1555-3D RFLP 115.6 (cM) Marker Identity View Maps
Wheat - Cheyenne/Wichita RI RFLP QTL 1 - 3A AQGU008 QTL 85.1 - 91.1 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - G BCD1555 RFLP 22.4 (cM) Marker Identity View Maps
Wheat - Cheyenne/Wichita RI RFLP QTL 1 - 3A Xbcd1555-3A RFLP 87.1 (cM) Marker Identity View Maps
Xisu1463 RFLP 4.4 Oat - Oat, KxO, 2003 - 24_26_34 ISU1463 RFLP 8.13 (cM) Marker Identity View Maps
Xisu1874A RFLP 0 Oat - Oat, KxO, 2003 - 24_26_34 isu1874a RFLP 6.17 (cM) Marker Identity View Maps
AQDF281 QTL -1 - 5 Wheat - Wheat composite QTL 2004 - 3A Xbcd15.1 RFLP 26 (cM) qtl_marker View Maps
Wheat - IWGSC Physical 3B - 3B Xbcd1555-3B RFLP 185,313,743 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 BCD1555 RFLP 9.99 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 ISU1463 RFLP 8.13 (cM) qtl_marker View Maps
Barley - Barley consensus 2003 - 7H BCD15c RFLP 16.7 (cM) qtl_marker View Maps
Wheat - Cornell Synthetic/Opata 1995 - 4D Xbcd15-4D RFLP 70.5 (cM) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 3A Xbcd15.1 RFLP 74 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 BCD1555 RFLP 39,565,643 - 39,566,233 (bp) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 3B Xbcd1555 RFLP 63 (cM) qtl_marker View Maps
Wheat - Cornell Synthetic/Opata 1995 - 3D Xbcd1555-3D RFLP 115.6 (cM) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 3D Xbcd1555a RFLP 93 (cM) qtl_marker View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 3B Xbcd1555-3B RFLP 140.6 (cM) qtl_marker View Maps
Wheat - Composite 2004 - 4D Xbcd15.1 RFLP 74 (cM) qtl_marker View Maps
Wheat - Composite 2004 - 3B Xbcd1555 RFLP 63 (cM) qtl_marker View Maps
Barley - Barley consensus - 1995 - 1H BCD15 RFLP 58.1 (cM) qtl_marker View Maps
Barley - Barley consensus 2003 - 6H BCD15b RFLP 116.9 (cM) qtl_marker View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 4D Xbcd15-4D RFLP 70.5 (cM) qtl_marker View Maps
Wheat - Composite 2004 - 3D Xbcd1555a RFLP 93 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - A BCD15 RFLP 23.5 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 isu1874a RFLP 6.17 (cM) qtl_marker View Maps
Wheat - Cornell Synthetic/Opata 1995 - 3B Xbcd1555-3B RFLP 140.6 (cM) qtl_marker View Maps
Wheat - Cornell Synthetic/Opata 1995 - 3A Xbcd15-3A RFLP 5.1 (cM) qtl_marker View Maps
Wheat - Composite 2004 - 3A Xbcd15.1 RFLP 26 (cM) qtl_marker View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 3A Xbcd15-3A RFLP 5.1 (cM) qtl_marker View Maps
Barley - Barley consensus 2003 - 4H BCD15a RFLP 57.5 (cM) qtl_marker View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 3D Xbcd1555-3D RFLP 115.6 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - G BCD1555 RFLP 22.4 (cM) qtl_marker View Maps
Wheat - Cheyenne/Wichita RI RFLP QTL 1 - 3A Xbcd1555-3A RFLP 87.1 (cM) qtl_marker View Maps
AQDF280 QTL -1 - 11.1 Wheat - Wheat composite QTL 2004 - 3A Xbcd15.1 RFLP 26 (cM) qtl_marker View Maps
Wheat - IWGSC Physical 3B - 3B Xbcd1555-3B RFLP 185,313,743 (bp) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 UMN41 RFLP 39,949,957 - 39,950,239 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 BCD1555 RFLP 9.99 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 ISU1463 RFLP 8.13 (cM) qtl_marker View Maps
Barley - Barley consensus 2003 - 7H BCD15c RFLP 16.7 (cM) qtl_marker View Maps
Wheat - Cornell Synthetic/Opata 1995 - 4D Xbcd15-4D RFLP 70.5 (cM) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 3A Xbcd15.1 RFLP 74 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 1 BCD1555 RFLP 39,565,643 - 39,566,233 (bp) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 3B Xbcd1555 RFLP 63 (cM) qtl_marker View Maps
Wheat - Cornell Synthetic/Opata 1995 - 3D Xbcd1555-3D RFLP 115.6 (cM) qtl_marker View Maps
Wheat - Wheat composite QTL 2004 - 3D Xbcd1555a RFLP 93 (cM) qtl_marker View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 3B Xbcd1555-3B RFLP 140.6 (cM) qtl_marker View Maps
Wheat - Composite 2004 - 4D Xbcd15.1 RFLP 74 (cM) qtl_marker View Maps
Wheat - Composite 2004 - 3B Xbcd1555 RFLP 63 (cM) qtl_marker View Maps
Barley - Barley consensus - 1995 - 1H BCD15 RFLP 58.1 (cM) qtl_marker View Maps
Barley - Barley consensus 2003 - 6H BCD15b RFLP 116.9 (cM) qtl_marker View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 4D Xbcd15-4D RFLP 70.5 (cM) qtl_marker View Maps
Wheat - Composite 2004 - 3D Xbcd1555a RFLP 93 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - A BCD15 RFLP 23.5 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 isu1874a RFLP 6.17 (cM) qtl_marker View Maps
Wheat - Cornell Synthetic/Opata 1995 - 3B Xbcd1555-3B RFLP 140.6 (cM) qtl_marker View Maps
Wheat - Cornell Synthetic/Opata 1995 - 3A Xbcd15-3A RFLP 5.1 (cM) qtl_marker View Maps
Wheat - Composite 2004 - 3A Xbcd15.1 RFLP 26 (cM) qtl_marker View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 3A Xbcd15-3A RFLP 5.1 (cM) qtl_marker View Maps
Barley - Barley consensus 2003 - 4H BCD15a RFLP 57.5 (cM) qtl_marker View Maps
Wheat - Synthetic/Opata RI RFLP/SSR QT - 3D Xbcd1555-3D RFLP 115.6 (cM) qtl_marker View Maps
Maize - UMC 1998 - 3 UMN41 RFLP 81.9 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - G BCD1555 RFLP 22.4 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 UMN41 RFLP 10 (cM) qtl_marker View Maps
Wheat - Cheyenne/Wichita RI RFLP QTL 1 - 3A Xbcd1555-3A RFLP 87.1 (cM) qtl_marker View Maps