grain_iconCMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Maize-Iowa Mo17/H99 RI QTL 1996
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 7
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
RFLP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: QTL [ View Map Type Info ]
Map Set Name: Maize - Iowa Mo17/H99 RI QTL 1996 [ View Map Set Info ]
Map Name: 7
Map Start: 0 cM
Map Stop: 150.3 cM
Features by Type:
13 RFLP
13 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 13 of 13.
Maize - Iowa Mo17/H99 RI QTL 1996 - 7
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
BNL5.40 RFLP 25.6 Maize - IBM2 2008 Neighbors - 5 bnl5.40 Probed site 463.96 (cM) maizegdb_to_gramene View Maps
Maize - UMC 1998 - 5 BNL5.40 RFLP 119 (cM) Marker Identity View Maps
Oryza sativa - CIRAD IR64/Azu DH QTL 2003 - 2 BNL5_40 RFLP 129.2 (cM) Marker Identity View Maps
Maize - UWM B73/Mo17 QTL 1996 - 5 BNL5.40 RFLP 118.6 (cM) Marker Identity View Maps
Maize - Bins - 5 Bin 5.06 Maize Bin 121 - 134 (bins) Maize bin marker View Maps
Maize - BNL 1996 - 5 BNL5.40 RFLP 146.9 (cM) Marker Identity View Maps
Maize - Maize Bins QTL 2005 - 5 Bin 5.06 Maize Bin 121 - 134 (cM) Maize bin marker View Maps
UMC35 RFLP 148.6 Sorghum - Paterson 2003 - B UMC035 RFLP 3.1 (cM) Marker Identity View Maps
Maize - FPC maize May 2006 - ctg325 AC155434 Genomic DNA 2,099 - 2,121 (bands) hybridisation View Maps
Maize - Curated AGI FPC Oct 2004 - ctg314.7 b0075H02 Clone 2,085 - 2,105 (bands) hybridisation View Maps
Maize - Curated AGI FPC Oct 2004 - ctg314.7 b0259M03 Genomic DNA 2,097 - 2,119 (bands) hybridisation View Maps
Maize - AGI FPC Oct 2004 - ctg314 umc35a RFLP 2,097 - 2,105 (bands) Marker Identity View Maps
Maize - CIMMYT Ac7729/Ac7643S QTL 1996 - 7 umc35a RFLP 116 (cM) Marker Identity View Maps
Maize - SSR IBM 2001 - 7 umc35a RFLP 422.1 (cM) Marker Identity View Maps
Maize - FPC maize May 2006 - ctg325 ZMMBBb0075H02 Clone 2,085 - 2,105 (bands) hybridisation View Maps
Maize - IBM 2002 - 7 umc35a RFLP 551.2 (cM) Marker Identity View Maps
Maize - Bins - 7 Bin 7.05 Maize Bin 116.3 - 137.5 (bins) Maize bin marker View Maps
Maize - BNL 1996 - 7 umc35a RFLP 169.9 (cM) Marker Identity View Maps
Maize - Bologna Os420/Iab78 QTL 1998 - 7 umc35a RFLP 122 (cM) Marker Identity View Maps
Maize - Curated AGI FPC Oct 2004 - ctg314.7 AC155434 Genomic DNA 2,097 - 2,119 (bands) hybridisation View Maps
Maize - Maize Bins QTL 2005 - 7 Bin 7.05 Maize Bin 116.3 - 137.5 (cM) Maize bin marker View Maps
Maize - FPC maize May 2006 - ctg325 UMC35 RFLP 2,108 (bands) Marker Identity View Maps
Maize - IBM2 2008 Neighbors - 7 umc35a Probed site 644.14 (cM) maizegdb_to_gramene View Maps
Maize - UWM B73/Mo17 QTL 1996 - 7 UMC35 RFLP 174.5 (cM) Marker Identity View Maps
Maize - UMC 1998 - 7 umc35a RFLP 147.5 (cM) Marker Identity View Maps
Maize - Curated AGI FPC Oct 2004 - ctg314.7 umc35a RFLP 2,097 - 2,105 (bands) Marker Identity View Maps
Maize - FPC maize May 2006 - ctg325 AC155434 Genomic DNA 2,097 - 2,119 (bands) hybridisation View Maps
Maize - Bins - 2 Bin 2.09 Maize Bin 171.9 - 200.2 (bins) Maize bin marker View Maps
Maize - Maize Bins QTL 2005 - 2 Bin 2.09 Maize Bin 171.9 - 200.2 (cM) Maize bin marker View Maps
phi082 RFLP 150.3 Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 7 UAZ230A RFLP 93.3 (cM) Marker Identity View Maps
Maize - IBM2 2008 Neighbors - 4 uaz230a Probed site 292.9 (cM) maizegdb_to_gramene View Maps
Maize - Bins - 7 Bin 7.05 Maize Bin 116.3 - 137.5 (bins) Maize bin marker View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 2 T14679 EST 57,418,939 - 57,418,983 () contained_in_sequence View Maps
Oryza sativa x Oryza longistaminata - Cornell RFLP 2001 - 3 UAZ230C RFLP 21.35 (cM) Marker Identity View Maps
Maize - Maize Bins QTL 2005 - 7 Bin 7.05 Maize Bin 116.3 - 137.5 (cM) Maize bin marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 7 UAZ230 RFLP 29,003,301 - 29,003,676 (bp) Marker Identity View Maps
Maize - Bins - 4 Bin 4.05 Maize Bin 61.7 - 78.4 (bins) Maize bin marker View Maps
Maize - BNL 1996 - 4 UAZ230A RFLP 75.4 (cM) Marker Identity View Maps
Maize - Maize Bins QTL 2005 - 4 Bin 4.05 Maize Bin 61.7 - 78.4 (cM) Maize bin marker View Maps
BNL14.07 RFLP 110 Maize - INRA Io/F2 Composite QTL 1996 - 7 DQO29 QTL 72 - 90 (cM) qtl_marker View Maps
Maize - INRA Io/F2 Composite QTL 1996 - 7 BNL14.07 RFLP 100 (cM) Marker Identity View Maps
Maize - IBM2 2008 Neighbors - 7 bnl14.07 Probed site 455.1 (cM) maizegdb_to_gramene View Maps
Maize - UMC 1998 - 7 BNL14.07 RFLP 97.5 (cM) Marker Identity View Maps
Maize - Maize Bins QTL 2005 - 7 Bin 7.04 Maize Bin 91.5 - 116.3 (cM) Maize bin marker View Maps
Maize - Bins - 7 Bin 7.04 Maize Bin 91.5 - 116.3 (bins) Maize bin marker View Maps
Maize - BNL 1996 - 7 BNL14.07 RFLP 121.7 (cM) Marker Identity View Maps
BNL15.21 RFLP 52.4 Maize - IBM2 2008 Neighbors - 7 bnl15.21 Probed site 309.9 (cM) maizegdb_to_gramene View Maps
Maize - UMC 1998 - 7 BNL15.21 RFLP 70.9 (cM) Marker Identity View Maps
Maize - SSR IBM 2001 - 7 BNL15.21 RFLP 206 (cM) Marker Identity View Maps
Maize - Bins - 7 Bin 7.03 Maize Bin 66.1 - 91.5 (bins) Maize bin marker View Maps
Maize - Maize Bins QTL 2005 - 7 Bin 7.03 Maize Bin 66.1 - 91.5 (cM) Maize bin marker View Maps
Maize - Cornell Wilson 1999 - 7 BNL15.21 RFLP 77.5 (cM) Marker Identity View Maps
Maize - IBM 2002 - 7 BNL15.21 RFLP 263.3 (cM) Marker Identity View Maps
Maize - BNL 1996 - 7 BNL15.21 RFLP 83.1 (cM) Marker Identity View Maps
BNL7.61 RFLP 108 Maize - BNL 1996 - 7 BNL7.61 RFLP 121.7 (cM) Marker Identity View Maps
Maize - Maize Bins QTL 2005 - 7 Bin 7.04 Maize Bin 91.5 - 116.3 (cM) Maize bin marker View Maps
Maize - Bins - 7 Bin 7.04 Maize Bin 91.5 - 116.3 (bins) Maize bin marker View Maps
Maize - IBM2 2008 Neighbors - 7 bnl7.61 Probed site 455.1 (cM) maizegdb_to_gramene View Maps
Maize - UMC 1998 - 7 BNL7.61 RFLP 97.5 (cM) Marker Identity View Maps
bnl8.37 RFLP 109 Maize - Maize Bins QTL 2005 - 4 Bin 4.04 Maize Bin 49.3 - 61.7 (cM) Maize bin marker View Maps
Sorghum - Mace 2009 - 2 bnl8.37 RFLP 176.6 (cM) Marker Identity View Maps
Maize - Maize Bins QTL 2005 - 7 Bin 7.04 Maize Bin 91.5 - 116.3 (cM) Maize bin marker View Maps
Maize - Bins - 4 Bin 4.04 Maize Bin 49.3 - 61.7 (bins) Maize bin marker View Maps
Maize - Bins - 7 Bin 7.04 Maize Bin 91.5 - 116.3 (bins) Maize bin marker View Maps
Maize - UMC 1998 - 7 bnl8.37a RFLP 97.5 (cM) Marker Identity View Maps
Maize - BNL 1996 - 7 bnl8.37a RFLP 123.8 (cM) Marker Identity View Maps
Maize - IBM2 2008 Neighbors - 7 bnl8.37a Probed site 455.1 (cM) maizegdb_to_gramene View Maps
Sorghum - Klein 2004 - LG-02 bnl8.37 RFLP 171.7 (cM) Marker Identity View Maps
BNL8.39 RFLP 118.1 Maize - IBM2 2008 Neighbors - 7 bnl8.39 Probed site 475.51 (cM) maizegdb_to_gramene View Maps
Maize - CIMMYT Ac7729/Ac7643S QTL 1996 - 7 DQL8 QTL 74 (cM) qtl_marker View Maps
Maize - UMC 1998 - 7 BNL8.39 RFLP 103.7 (cM) Marker Identity View Maps
Maize - BNL 1996 - 7 BNL8.39 RFLP 128.7 (cM) Marker Identity View Maps
Maize - Maize Bins QTL 2005 - 7 Bin 7.04 Maize Bin 91.5 - 116.3 (cM) Maize bin marker View Maps
Maize - Bins - 7 Bin 7.04 Maize Bin 91.5 - 116.3 (bins) Maize bin marker View Maps
Maize - CIMMYT Ac7729/Ac7643S QTL 1996 - 7 DQL36 QTL 75 (cM) qtl_marker View Maps
Maize - CIMMYT Ac7729/Ac7643S QTL 1996 - 7 BNL8.39 RFLP 80 (cM) Marker Identity View Maps
Maize - CIMMYT Ac7729/Ac7643S QTL 1996 - 7 DQL23 QTL 75 (cM) qtl_marker View Maps
bnl8.44A RFLP 145.2 Maize - UMC 1998 - 2 bnl8.44B RFLP 162.9 (cM) Marker Identity View Maps
Maize - Bins - 7 Bin 7.05 Maize Bin 116.3 - 137.5 (bins) Maize bin marker View Maps
Maize - IBM2 2008 Neighbors - 2 bnl8.44b Probed site 551.87 (cM) maizegdb_to_gramene View Maps
Maize - BNL 1996 - 7 bnl8.44A RFLP 162.5 (cM) Marker Identity View Maps
Maize - Bologna Os420/Iab78 QTL 1998 - 2 prp2 EST 25 (cM) contained_in_sequence View Maps
Maize - Maize Bins QTL 2005 - 2 Bin 2.08 Maize Bin 149.2 - 171.9 (cM) Maize bin marker View Maps
Maize - Maize Bins QTL 2005 - 7 Bin 7.05 Maize Bin 116.3 - 137.5 (cM) Maize bin marker View Maps
Maize - IBM2 2008 Neighbors - 7 bnl8.44a Probed site 575.49 (cM) maizegdb_to_gramene View Maps
Maize - UMC 1998 - 7 bnl8.44A RFLP 128.4 (cM) Marker Identity View Maps
Maize - Bins - 2 Bin 2.08 Maize Bin 149.2 - 171.9 (bins) Maize bin marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BNL8.44 RFLP 23,093,930 - 23,094,030 (bp) Marker Identity View Maps
isu145A RFLP 23.2 Sorghum - Klein 2004 - LG-08 isu145 RFLP 92.7 (cM) Marker Identity View Maps
Maize - Bins - 7 Bin 7.01 Maize Bin 22.8 - 43.5 (bins) Maize bin marker View Maps
Maize - IBM2 2008 Neighbors - 5 isu145c Probed site 23.5 (cM) maizegdb_to_gramene View Maps
Maize - Maize Bins QTL 2005 - 7 Bin 7.01 Maize Bin 22.8 - 43.5 (cM) Maize bin marker View Maps
Sorghum - Klein 2004 - LG-02 isu145 RFLP 131.9 - 137.1 (cM) Marker Identity View Maps
Sorghum - UGA BTx623/IS3620C RL SSR RFLP - 1 Xisu145.3 RFLP 0 (cM) Marker Identity View Maps
Sorghum - UGA BTx623/IS3620C RL SSR RFLP - 1 AQGN002 QTL 7 - 19.4 (cM) qtl_marker View Maps
Sorghum - UGA BTx623/IS3620C RL SSR RFLP - 1 AQHL035 QTL 9.4 - 58.1 (cM) qtl_marker View Maps
ISU86 RFLP 0 Maize - IBM 2002 - 7 ISU86 RFLP 216.1 (cM) Marker Identity View Maps
Maize - IBM2 2008 Neighbors - 7 isu86 Probed site 262.5 (cM) maizegdb_to_gramene View Maps
Sorghum - UGA BTx623/IS3620C RL SSR RFLP - 2 AQGN008 QTL 88.3 - 99.5 (cM) qtl_marker View Maps
Maize - Bins - 7 Bin 7.02 Maize Bin 43.5 - 66.1 (bins) Maize bin marker View Maps
Sorghum - Mace 2009 - 2 ISU86 RFLP 123.7 - 124.2 (cM) Marker Identity View Maps
Maize - Maize Bins QTL 2005 - 7 Bin 7.02 Maize Bin 43.5 - 66.1 (cM) Maize bin marker View Maps
Sorghum - UGA BTx623/IS3620C RL SSR RFLP - 2 Xisu86 RFLP 108.6 (cM) Marker Identity View Maps
Sorghum - Klein 2004 - LG-02 ISU86 RFLP 110.4 - 113.9 (cM) Marker Identity View Maps
umc110 RFLP 88.8 Maize - UWM B73/Mo17 QTL 1996 - 7 AQHM027 QTL 46.8 - 58 (cM) qtl_marker View Maps
Sorghum - Klein 2004 - LG-10 umc110 RFLP 64.3 - 68.1 (cM) Marker Identity View Maps
Maize - INRA Io/F2 Composite QTL 1996 - 7 DQO29 QTL 72 - 90 (cM) qtl_marker View Maps
Maize - Cornell Wilson 1999 - 7 umc110a RFLP 97 (cM) Marker Identity View Maps
Maize - UWM B73/Mo17 QTL 1996 - 7 umc110a RFLP 58 (cM) Marker Identity View Maps
Maize - Maize Bins QTL 2005 - 2 Bin 2.07 Maize Bin 133.8 - 149.2 (cM) Maize bin marker View Maps
Maize - Bins - 7 Bin 7.03 Maize Bin 66.1 - 91.5 (bins) Maize bin marker View Maps
Maize - IBM 2002 - 7 umc110a RFLP 318.7 (cM) Marker Identity View Maps
Maize - INRA Io/F2 Composite QTL 1996 - 7 DQM23 QTL 55.5 (cM) qtl_marker View Maps
Maize - BNL 1996 - 7 umc110a RFLP 88.8 (cM) Marker Identity View Maps
Maize - IBM2 2008 Neighbors - 7 umc110a Probed site 364.8 (cM) maizegdb_to_gramene View Maps
Maize - UWM B73/Mo17 QTL 1996 - 7 AQHM036 QTL 73.2 - 148.8 (cM) qtl_marker View Maps
Maize - Maize Bins QTL 2005 - 7 Bin 7.03 Maize Bin 66.1 - 91.5 (cM) Maize bin marker View Maps
Maize - INRA Io/F2 Composite QTL 1996 - 7 umc110a RFLP 72 (cM) Marker Identity View Maps
Sorghum - Mace 2009 - 10 umc110 RFLP 47.9 (cM) Marker Identity View Maps
Maize - Bins - 2 Bin 2.07 Maize Bin 133.8 - 149.2 (bins) Maize bin marker View Maps
Maize - UMC 1998 - 7 umc110a RFLP 88.6 (cM) Marker Identity View Maps
umc98B RFLP 45.8 Maize - CIMMYT Ac7729/Ac7643S QTL 1996 - 2 DQK9 QTL 131 (cM) qtl_marker View Maps
Maize - UMC 1998 - 2 umc98A RFLP 133.8 (cM) Marker Identity View Maps
Maize - Maize Bins QTL 2005 - 2 Bin 2.06 Maize Bin 110.1 - 133.8 (cM) Maize bin marker View Maps
Maize - BNL 1996 - 7 umc98B RFLP 70.4 (cM) Marker Identity View Maps
Maize - CIMMYT Ac7729/Ac7643S QTL 1996 - 2 DQK43 QTL 138 (cM) qtl_marker View Maps
Maize - Bins - 7 Bin 7.02 Maize Bin 43.5 - 66.1 (bins) Maize bin marker View Maps
Maize - CIMMYT Ac7729/Ac7643S QTL 1996 - 2 DQK35 QTL 139 (cM) qtl_marker View Maps
Maize - CIMMYT Ac7729/Ac7643S QTL 1996 - 2 DQK53 QTL 130 (cM) qtl_marker View Maps
Maize - Maize Bins QTL 2005 - 7 Bin 7.02 Maize Bin 43.5 - 66.1 (cM) Maize bin marker View Maps
Maize - IBM2 2008 Neighbors - 7 umc98b Probed site 259 (cM) maizegdb_to_gramene View Maps
Maize - UMC 1998 - 7 umc98B RFLP 61 (cM) Marker Identity View Maps
Maize - BNL 1996 - 2 umc98A RFLP 121.9 (cM) Marker Identity View Maps
Maize - CIMMYT Ac7729/Ac7643S QTL 1996 - 2 umc98A RFLP 117 (cM) Marker Identity View Maps
Maize - CIMMYT Ac7729/Ac7643S QTL 1996 - 2 DQK47 QTL 134 (cM) qtl_marker View Maps
Maize - Bins - 2 Bin 2.06 Maize Bin 110.1 - 133.8 (bins) Maize bin marker View Maps
Maize - IBM2 2008 Neighbors - 2 umc98a Probed site 405.76 (cM) maizegdb_to_gramene View Maps