grain_iconCMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Cornell Kan/Ogl QTL 1995
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 26
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
QTL
RFLP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: QTL [ View Map Type Info ]
Map Set Name: Oat - Cornell Kan/Ogl QTL 1995 [ View Map Set Info ]
Map Name: 26
Map Start: -0.6 cM
Map Stop: 22.6 cM
Features by Type:
6 QTL
4 RFLP
10 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 10 of 10.
Oat - Cornell Kan/Ogl QTL 1995 - 26
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Xisu1651 RFLP 0 Oat - Oat, KxO, 2003 - 24_26_34 ISU1651 RFLP 141 (cM) Marker Identity View Maps
Xisu563B RFLP 5.7 Oat - Oat, KxO, 2003 - 24_26_34 isu563b RFLP 137 (cM) Marker Identity View Maps
Oat - Oat, KxO, 2003 - 16_23 isu563a RFLP 27.7 (cM) Marker Identity View Maps
Xcdo373 RFLP 22 Barley - Barley consensus 2 - 1996 - 2H CDO373 RFLP 124.5 (cM) Marker Identity View Maps
Oat - Oat, KxO, 2003 - 24_26_34 CDO373 RFLP 122 (cM) Marker Identity View Maps
Barley - Barley consensus 2003 - 2H CDO373 RFLP 126.6 (cM) Marker Identity View Maps
Maize - IBM2 2008 Neighbors - 1 cdo373 Probed site 460.64 (cM) maizegdb_to_gramene View Maps
Barley - Barley consensus - 1995 - 2H CDO373 RFLP 48.6 (cM) Marker Identity View Maps
Maize - Maize Bins QTL 2005 - 1 Bin 1.05 Maize Bin 88.5 - 112.9 (cM) Maize bin marker View Maps
Wheat - Geneva/Augusta RI RFLP QTL 200 - 2D AQGT001 QTL 25 - 43 (cM) qtl_marker View Maps
Wheat - Geneva/Augusta RI RFLP QTL 200 - 2D Xcdo373-2D RFLP 27.9 (cM) Marker Identity View Maps
Oat - Cornell Diploid 1995 - E CDO373 RFLP 24.7 (cM) Marker Identity View Maps
Maize - Bins - 1 Bin 1.05 Maize Bin 88.5 - 112.9 (bins) Maize bin marker View Maps
Xbcd961 RFLP 12.4 Oat - Cornell Diploid 1995 - E BCD961 RFLP 10.4 (cM) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BE438772 EST 28,409,924 - 28,410,042 (bp) related_sequence View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BCD961 RFLP 28,412,408 - 28,412,750 (bp) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BE438681 EST 28,409,924 - 28,411,182 (bp) related_sequence View Maps
Oat - Oat, KxO, 2003 - 24_26_34 BCD961 RFLP 132 (cM) Marker Identity View Maps
Sorghum - Sorghum bicolor JGI8X 2007 - Chr. 5 BE438631 EST 62,262,351 - 62,262,410 () related_sequence View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BE438631 EST 28,412,408 - 28,412,750 (bp) related_sequence View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BCD961 RFLP 28,409,924 - 28,410,042 (bp) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BCD961 RFLP 28,409,924 - 28,411,182 (bp) Marker Identity View Maps
AQDF217 QTL -0.6 - 22.6 Barley - Barley consensus 2 - 1996 - 2H CDO373 RFLP 124.5 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 ISU1651 RFLP 141 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 CDO373 RFLP 122 (cM) qtl_marker View Maps
Barley - Barley consensus 2003 - 2H CDO373 RFLP 126.6 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - E BCD961 RFLP 10.4 (cM) qtl_marker View Maps
Barley - Barley consensus - 1995 - 2H CDO373 RFLP 48.6 (cM) qtl_marker View Maps
Wheat - Geneva/Augusta RI RFLP QTL 200 - 2D Xcdo373-2D RFLP 27.9 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BCD961 RFLP 28,412,408 - 28,412,750 (bp) qtl_marker View Maps
Oat - Cornell Diploid 1995 - E CDO373 RFLP 24.7 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 isu563b RFLP 137 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 BCD961 RFLP 132 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BCD961 RFLP 28,409,924 - 28,410,042 (bp) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BCD961 RFLP 28,409,924 - 28,411,182 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 16_23 isu563a RFLP 27.7 (cM) qtl_marker View Maps
AQDF212 QTL -0.6 - 22.6 Barley - Barley consensus 2 - 1996 - 2H CDO373 RFLP 124.5 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 ISU1651 RFLP 141 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 CDO373 RFLP 122 (cM) qtl_marker View Maps
Barley - Barley consensus 2003 - 2H CDO373 RFLP 126.6 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - E BCD961 RFLP 10.4 (cM) qtl_marker View Maps
Barley - Barley consensus - 1995 - 2H CDO373 RFLP 48.6 (cM) qtl_marker View Maps
Wheat - Geneva/Augusta RI RFLP QTL 200 - 2D Xcdo373-2D RFLP 27.9 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BCD961 RFLP 28,412,408 - 28,412,750 (bp) qtl_marker View Maps
Oat - Cornell Diploid 1995 - E CDO373 RFLP 24.7 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 isu563b RFLP 137 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 BCD961 RFLP 132 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BCD961 RFLP 28,409,924 - 28,410,042 (bp) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BCD961 RFLP 28,409,924 - 28,411,182 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 16_23 isu563a RFLP 27.7 (cM) qtl_marker View Maps
AQDF214 QTL -0.6 - 2.5 Oat - Oat, KxO, 2003 - 24_26_34 ISU1651 RFLP 141 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 isu563b RFLP 137 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 16_23 isu563a RFLP 27.7 (cM) qtl_marker View Maps
AQDF215 QTL -0.6 - 22.6 Barley - Barley consensus 2 - 1996 - 2H CDO373 RFLP 124.5 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 ISU1651 RFLP 141 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 CDO373 RFLP 122 (cM) qtl_marker View Maps
Barley - Barley consensus 2003 - 2H CDO373 RFLP 126.6 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - E BCD961 RFLP 10.4 (cM) qtl_marker View Maps
Barley - Barley consensus - 1995 - 2H CDO373 RFLP 48.6 (cM) qtl_marker View Maps
Wheat - Geneva/Augusta RI RFLP QTL 200 - 2D Xcdo373-2D RFLP 27.9 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BCD961 RFLP 28,412,408 - 28,412,750 (bp) qtl_marker View Maps
Oat - Cornell Diploid 1995 - E CDO373 RFLP 24.7 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 isu563b RFLP 137 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 BCD961 RFLP 132 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BCD961 RFLP 28,409,924 - 28,410,042 (bp) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 11 BCD961 RFLP 28,409,924 - 28,411,182 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 16_23 isu563a RFLP 27.7 (cM) qtl_marker View Maps
AQDF216 QTL -0.6 - 2.5 Oat - Oat, KxO, 2003 - 24_26_34 ISU1651 RFLP 141 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 isu563b RFLP 137 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 16_23 isu563a RFLP 27.7 (cM) qtl_marker View Maps
AQDF213 QTL -0.6 - 2.5 Oat - Oat, KxO, 2003 - 24_26_34 ISU1651 RFLP 141 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 24_26_34 isu563b RFLP 137 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 16_23 isu563a RFLP 27.7 (cM) qtl_marker View Maps