grain_iconCMap Home | Maps | Map Search | Feature Search | Matrix | Map Sets | Feature Types | Map Types | Evidence Types | Species | Saved Links | Help | Tutorial  
*Bookmarks for this page will fail after this session expires. Use the "Save Link" button to create a permanent link


**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
 Map Options
 Map Options
Map Set Oat-Cornell Kan/Ogl QTL 1995
(Reference Set)
Min.
Correspondences
Align Vertically
Stack
Maps 9
Start
Stop
Magnification
Flipped
hint: To save time, select the desired options before redrawing the map.
(Hide Map Menu)
 Feature Options
 Feature Options
Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence
Always Display
QTL
RAPD
RFLP
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:
No Yes
(Hide Feature Menu)
 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score
Greater Than
Score
Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
(Hide Correspondence Menu)
 Display Options
 Display Options
Map Size: tiny small medium large Custom
Font Size: Small Medium Large
Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
(Hide Display Menu)
 Advanced Options
 Advanced Options

Draw Maps Using
Same Scale:
No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order
Number of
Correspondences
Ignore Image Map
Sanity Check:
No Yes
(Hide Advanced Menu)


Map Details

Map Type: QTL [ View Map Type Info ]
Map Set Name: Oat - Cornell Kan/Ogl QTL 1995 [ View Map Set Info ]
Map Name: 9
Map Start: -0.6 cM
Map Stop: 15.6 cM
Features by Type:
5 QTL
1 RAPD
4 RFLP
10 Total

Map Features

Restrict by Map:
[ Download Map Data ]
[ Download Feature Correspondence Data ]
Items 1 to 10 of 10.
Oat - Cornell Kan/Ogl QTL 1995 - 9
(Click headers to resort)
Comparative Maps
Feature Type Position (cM) Map Feature Type Position Evidence Actions
Xbcd1108 RFLP 2.6 Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD1108 RFLP 32,645,865 - 32,645,956 (bp) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD1108 RFLP 32,645,385 - 32,645,677 (bp) Marker Identity View Maps
Oat - Oat, KxO, 2003 - 9 BCD1108 RFLP 0.93 (cM) Marker Identity View Maps
Xcdo1445A RFLP 6.1 Oat - Oat, KxO, 2003 - 9 cdo1445a RFLP 2.98 (cM) Marker Identity View Maps
Oat - Cornell Diploid 1995 - B CDO1445 RFLP 11.6 (cM) Marker Identity View Maps
Oat - Oat, KxO, 2003 - 7_10_28 cdo1445b RFLP 67.8 (cM) Marker Identity View Maps
Xbcd1237 RFLP 9.2 Oat - Cornell Diploid 1995 - B BCD1237 RFLP 15.4 (cM) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD1237 RFLP 33,466,109 - 33,466,670 (bp) Marker Identity View Maps
Oat - Oat, KxO, 2003 - 9 BCD1237 RFLP 5.75 (cM) Marker Identity View Maps
Xbcd978 RFLP 0 Oat - Oat, KxO, 2003 - 9 BCD978 RFLP 0 (cM) Marker Identity View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD978 RFLP 32,770,997 - 32,771,114 (bp) Marker Identity View Maps
Oat - Cornell Diploid 1995 - B BCD978 RFLP 17.4 (cM) Marker Identity View Maps
AQDF375 QTL -0.6 - 2.6 Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD1108 RFLP 32,645,865 - 32,645,956 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 9 BCD978 RFLP 0 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD978 RFLP 32,770,997 - 32,771,114 (bp) qtl_marker View Maps
Oat - Cornell Diploid 1995 - B BCD978 RFLP 17.4 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 9 cdo1445a RFLP 2.98 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - B CDO1445 RFLP 11.6 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 7_10_28 cdo1445b RFLP 67.8 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD1108 RFLP 32,645,385 - 32,645,677 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 9 BCD1108 RFLP 0.93 (cM) qtl_marker View Maps
AQDF371 QTL 8.6 - 15.6 Oat - Cornell Diploid 1995 - B BCD1237 RFLP 15.4 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD1237 RFLP 33,466,109 - 33,466,670 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 9 BCD1237 RFLP 5.75 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 9 cdo1445a RFLP 2.98 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - B CDO1445 RFLP 11.6 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 7_10_28 cdo1445b RFLP 67.8 (cM) qtl_marker View Maps
AQDF373 QTL 12.5 - 15.6 Oat - Cornell Diploid 1995 - B BCD1237 RFLP 15.4 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD1237 RFLP 33,466,109 - 33,466,670 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 9 BCD1237 RFLP 5.75 (cM) qtl_marker View Maps
AQDF372 QTL -0.6 - 15.6 Oat - Cornell Diploid 1995 - B BCD1237 RFLP 15.4 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD1108 RFLP 32,645,865 - 32,645,956 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 9 BCD978 RFLP 0 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD978 RFLP 32,770,997 - 32,771,114 (bp) qtl_marker View Maps
Oat - Cornell Diploid 1995 - B BCD978 RFLP 17.4 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD1237 RFLP 33,466,109 - 33,466,670 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 9 BCD1237 RFLP 5.75 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 9 cdo1445a RFLP 2.98 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - B CDO1445 RFLP 11.6 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 7_10_28 cdo1445b RFLP 67.8 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD1108 RFLP 32,645,385 - 32,645,677 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 9 BCD1108 RFLP 0.93 (cM) qtl_marker View Maps
AQDF374 QTL -0.6 - 15.6 Oat - Cornell Diploid 1995 - B BCD1237 RFLP 15.4 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD1108 RFLP 32,645,865 - 32,645,956 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 9 BCD978 RFLP 0 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD978 RFLP 32,770,997 - 32,771,114 (bp) qtl_marker View Maps
Oat - Cornell Diploid 1995 - B BCD978 RFLP 17.4 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD1237 RFLP 33,466,109 - 33,466,670 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 9 BCD1237 RFLP 5.75 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 9 cdo1445a RFLP 2.98 (cM) qtl_marker View Maps
Oat - Cornell Diploid 1995 - B CDO1445 RFLP 11.6 (cM) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 7_10_28 cdo1445b RFLP 67.8 (cM) qtl_marker View Maps
Oryza sativa japonica - Gramene Annot Seq 2009 - Chr. 4 BCD1108 RFLP 32,645,385 - 32,645,677 (bp) qtl_marker View Maps
Oat - Oat, KxO, 2003 - 9 BCD1108 RFLP 0.93 (cM) qtl_marker View Maps
Xacor209A RAPD 15 Oat - Oat, KxO, 2003 - 5 ACOR209 RAPD 10.9 (cM) Marker Identity View Maps
Oat - Oat, KxO, 2003 - 9 ACOR209 RAPD 10.8 (cM) Marker Identity View Maps