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Oryza sativa (indica cultivar-group) protein "Q6ZL57" (Auxin-responsive protein IAA24) | Accession | Q6ZL57 | ||||||
|---|---|---|---|---|---|---|---|
| Species | Oryza sativa (indica cultivar-group) [ GR_tax:013682 ] | ||||||
| Name | Auxin-responsive protein IAA24 | ||||||
| Symbol | IAA24 | ||||||
| Synonyms (5) |
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| E.C. Numbers (0) | None | ||||||
| Gene Names (1) | iaa28 (indoleacetic acid 24) | ||||||
| Organelle | Not available | ||||||
| Best Hits To TIGR Rice Gene Models (0) | None [ Click here to generate a BLASTP query ] | ||||||
| IRGSP/RAP Genes (0) | None | ||||||
| Source | SWISSPROT | ||||||
| GenBank Accessions (1) | BAC83117 | ||||||
| UniProt Accession (Sequence) | Q6ZL57 | ||||||
| Cultivar | PUSA BASMATI 1 ( GRIN , IRIS ) | ||||||
| Comment | Relative mRNA levels of iaa24 is at its highest in flowers and etioloated shoots, Callus, it is also present in the callus and green shoots, and at lower levels in the roots. Relative mRNA levels are extremely low in green shoots and flowers. There is approximately a 5-fold increase in mRNA levels when coleoptile segments of 3-day-old etiolated seedlings are treated with 30 micro mols of 2,4-D in comparison to auxin depleted controls. Early auxin responsive gene. Aux/IAA genes encode short-lived transcriptional factors that act to repress the expression of early auxin response genes when auxin concentrations are low. (Imported from Gene GR:0020028) |
Associated Ontologies (8) | Term Type | Term | Reference | Evidence | |||
|---|---|---|---|---|---|---|
| Molecular Function | protein dimerization activity (GO:0046983) | Jaiswal-P et al., 2003 |
| |||
| Biological Process | response to auxin stimulus (GO:0009733) | Jain-M et al., 2006 | ISS | |||
| regulation of translation (GO:0006417) | Jaiswal-P et al., 2003 |
| ||||
| GO:0045449 (GO:0045449) | Jaiswal-P et al., 2003 |
| ||||
| Cellular Component | nucleus (GO:0005634) | Jaiswal-P et al., 2003 |
| |||
| plastid (GO:0009536) | Jaiswal-P et al., 2002 | IEA | ||||
| RCA | ||||||
| Plant Structure | coleoptile (PO:0020033) | Jain-M et al., 2006 | ISS | |||
| Plant Growth and Development Stage | leaf production stage (PO:0007133) | Jain-M et al., 2006 | ISS |
Keywords (0)
Similarity to Other Proteins (22) | Viridiplantae Green plants -Embryophytes (plants) -Magnoliophytes (flowering plants) -Monocots | Grasses | Rice | Maize | Sorghum | Wheat | Barley | Rye | Oat | Sugarcane -Dicots | Brassicaceae | Arabidopsis | Fabaceae (Legumes) | Solanaceae | Cucurbitaceae |
| Others : Fungi | Metazoa |
| 3D protein structures : BLink from NCBI |
Protein Features (5) | Pfam (Info) | PF02309; AUX_IAA | All Members of this Family | |
|---|---|---|---|
| Prosite (Info) | PS50962; IAA_ARF | Sequence info. not available All Members of this Family |
|
| Physio-chemical features | Q6ZL57 | ||
| ProtoMap (Info) | IAA24_ORYSA | ||
| Feature Type | Residues (From - To) | Evidence | |
| Signal peptide | 1 - 13 | Jaiswal-P et al., 2002 | |
Database Cross-References (3) 
