Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||
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Accession | GR:0100114 | ||
Gene Symbol | Gi | ||
Gene Name | Gigantea | ||
Synonyms (2) |
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E.C. Numbers (0) | |||
Pathway Reactions (0) | |||
Chromosome No. | 1 | ||
Gene Type | CDS (Protein coding) | ||
Has Phenotype | yes | ||
Description | This is a homolog of Arabidopsis gene GIGANTEA (GI) At1g22770. Similar to the Arabidopsis gene, its expression is circadian clock-controlled. Unlike the Arabidopsis GI, the rice Gi acts as a suppressor of flowering under log-day photoperiodic conditions. |
Protein |
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Nucleotide (DNA) |
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 4,328,152-4,337,486bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | JRGP RFLP 2000 | BNL6.32 | 1 | 20.2-24cM | View Comparative Map | |||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | JRGP RFLP 2000 | 1 | 20.2 cM | 24 cM | jrgp-2000-1-ip16 |
2 | Rice japonica MSU6 | Chr. 1 | 4328152 bp | 4337486 bp | grjp2009a-1-GR:0100114 |
Trait | days to heading (TO:0000137) |
Plant Structure | root (PO:0009005), shoot system (PO:0009006), vascular leaf (PO:0009025), inflorescence (PO:0009049) |
Plant Growth and Development Stage | inflorescence emergence stage (PO:0007041) |
Cereal Plant Growth Stage | 06-heading stage (GRO:0007044) |
Cellular Component | nucleus (GO:0005634) |
Biological Process | inflorescence development (GO:0010229) |
Environment | sodium chloride regimen (EO:0007048), long day length regimen (EO:0007199), short day length regimen (EO:0007200), Magnaporthe grisea (EO:0007226), tissue culture growth media (EO:0007266), continuous dark (no light) regimen (EO:0007270), rice yellow mottle virus (EO:0007318), mechanical damage (EO:0007373), unknown environment (EO:0007403), drought environment (EO:0007404) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
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chr1 | 4,328,152 | 4,337,486 | ~160K SNPs x 20 accessions (McNally 2... | 14 | Search for SNPs |
chr1 | 4,328,152 | 4,337,486 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr1 | 4,328,152 | 4,337,486 | Huang X, et al, Nat Genetics 2010 Nov... | 9 | Search for SNPs |
chr1 | 4,328,152 | 4,337,486 | RiceDiversity 44K SNP assay, 34 trait... | 9 | Search for SNPs |
chr1 | 4,328,152 | 4,337,486 | RiceDiversity 44K SNP assay, 34 trait... | 4 | Search for SNPs |