Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||||
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Accession | GR:0061383 | ||||||||
Gene Symbol | ga20ox1 | ||||||||
Gene Name | Gibberellin C-20 oxidase 1 | ||||||||
Synonyms (7) |
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E.C. Numbers (1) | 1.14.11.15 | ||||||||
Pathway Reactions (2) |
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Chromosome No. | 3 | ||||||||
Gene Type | Not sequenced | ||||||||
Has Phenotype | yes | ||||||||
Description | The deduced protein sequence suggests that the enzyme family GA20ox catalyzes the conversion of GA53 to GA20, thus taking part in the Gibberellic acid biosynthesis pathway. There is no phenotype associated with it, however this bears a very strong homology with the well known rice green revolution gene semidwarf-1 (sd1). |
Protein |
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Nucleotide (DNA) |
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 36,143,590-36,145,443bp | View Comparative Map | |||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | Rice japonica MSU6 | Chr. 3 | 36143590 bp | 36145443 bp | grjp2009a-3-GR:0061383 |
Trait | growth and development trait (TO:0000357), enzyme activity trait (TO:0000599) |
Plant Growth and Development Stage | whole plant development stage (PO:0007033), leaf production stage (PO:0007133), sporophyte vegetative stage (PO:0007134) |
Cereal Plant Growth Stage | rice growth stage (GRO:0007040), 02-seedling (GRO:0007047), A-vegetative stage (GRO:0007139) |
Biological Process | gibberellin metabolic process (GO:0009685) |
Environment | cold temperature regimen (EO:0007174), Magnaporthe grisea (EO:0007226), laboratory study (EO:0007255), unknown environment (EO:0007403) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
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chr3 | 36,143,590 | 36,145,443 | ~160K SNPs x 20 accessions (McNally 2... | 0 | |
chr3 | 36,143,590 | 36,145,443 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr3 | 36,143,590 | 36,145,443 | Huang X, et al, Nat Genetics 2010 Nov... | 18 | Search for SNPs |
chr3 | 36,143,590 | 36,145,443 | RiceDiversity 44K SNP assay, 34 trait... | 18 | Search for SNPs |
chr3 | 36,143,590 | 36,145,443 | RiceDiversity 44K SNP assay, 34 trait... | 0 |