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Release Notes
Browse Ontology Database by:
Trait
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Plant Structure
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Growth Stage
Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
PO:Plant Structure
PO:Plant Growth and Development Stage
GRO:Cereal Plant Growth Stage
GO:Cellular Component
GO:Molecular Function
GO:Biological Process
EO:Environment
GenBank Accession
Gramene Protein Accession
All Fields
Type:
Not sequenced
CDS (Protein coding)
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Not classified
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Sequenced Gene Loci
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Species:
Aegilops
Aegilops x Triticum
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All Species
With Phenotype
E.g.,
d1
,
dwarf-1
,
GR:0060184
,
flower*
,
*tillering stage*
Or
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Oryza sativa gene "POX2" (GR:0060686)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060686
Gene Symbol
POX2
Gene Name
PEROXIDASE 2
Synonyms (4)
Pox2
Peroxidase-2
Pox2
Peroxidase-2
E.C. Numbers (0)
Pathway Reactions (0)
Chromosome No.
12
Gene Type
Not sequenced
Has Phenotype
yes
Description
under curation
Alleles (0)
Germplasm (0)
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (2)
Oryza sativa (2)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Hokkaido Morphological 2000
BNL6.32
12
40-40cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
QTL
JNIG W1944/Peik QTL 2002
BNL6.32
12
176.8-176.8cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Gene Map Positions (2)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
Hokkaido Morphological 2000
12
40 cM
40 cM
morph-2000-12-7
2
JNIG W1944/Peik QTL 2002
12
176.8 cM
176.8 cM
cah2002a-115
Associated Ontologies (1)
Molecular Function
peroxidase activity
(GO:0004601)
Associated QTL (0)
Database Cross-References (1)
Oryzabase:
964
Literature (12)
Shahi-B-B, Chu-Y-E, Oka-H-I., "Analysis of genes controlling peroxidase isozymes in Oryza sativa and O. perennis",
Japan. J. Genet.
, 1969, vol. 44, pp. 321-328
Pai-C, Endo-T, Oka-H-I., "Genic analysis for peroxidase isozymes and thier organ specifiicity in Oryza perennis, sativa-O",
Canadian journal of genetics and cytology. Journal canadien de genetique et de cytologie
, 1973, vol. 15(4), pp. 845-853
Ishikawa-R, Kinoshita-T, Morishima-H., "Trisomic analysis of genes for isozymes Location of Cat-1, Acp-1 and Pax-2, on chromosomes",
RGN
, 1987, vol. 4, pp. 75-76
Wu-K-S, Glaszmann-J-C, Khush-G-S., "Chromosomal locations of ten isozyme in rice (Oryza sativa L.) through trisomic analysis",
Biochemical genetics
, 1988, vol. 26, pp. 303-320
Guiderdoni-E, Glaszmann-J-C, Courtois-B., "Segregation of 12 isozyme genes among doubled haploid lines derived from a japonica x indica cross of rice (Oryza sativa L.)",
Euphytica
, 1989, vol. 42(1-2), pp. 45-53
Ishikawa-R, Morishima-H, Mori-K, Kinoshita-T., "Choromosomal analysis of isozyme loci and the allelic expression at cellular level in rice. Genetical studies on rice plant, XCVII",
J Fac Agr Hokkaido Univ
, 1989, vol. 64(1), pp. 85-98
Ishikawa-R, Morishima-H., "Linkage analysis for four isozyme loci, Adh-1, Acp-1, Pox-2 and Pgd-2",
Rice Genetics Newsletter
, 1989, vol. 6, pp. 109-110
Pham-J-L, Glaszmann-J-C, Sano-R, Barbier-P, Ghesquiere-A, Second-G., "Isozyme markers in rice: genetic analysis and linkage relationships",
Genome ( National Research Council Canada )
, 1990, vol. 33(3), pp. 348-359
Ishikawa-R., "Integration of isozyme genes on chromosome 12 into a linkage map",
Rice Genetics Newsletter
, 1991, vol. 8, pp. 100-101
Ishikawa-R, Morishima-H, Kinoshita-T., "Linkage analysis and application of isozyme genes in rice",
Rice Genetics, II. IRRI, Manila, Philippines
, 1991, pp. 127-136
Ishikawa-R, Morishima-H, Kinoshita-T, Harada-T, Niizeki-M, Saito-K., "Linkage analysis of nine isozyme genes on the conventional linkage map in rice",
Japanese Journal of Breeding
, 1991, vol. 41(2), pp. 265-272
Causse-M-A, Fulton-T-M, Cho-Y-G, Ahn-S-N, Chunwongse-J, Wu-K, Xiao-J, Yu-Z, Ronald-P-C, Harrington-S-E, Second-G, McCouch-S-R, Tanksley-S-D., "Saturated molecular map of the rice genome based on an interspecific backcross population",
Genetics
, 1994, vol. 138, pp. 1251-1274
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