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Browse Ontology Database by:
Trait
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Plant Structure
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Find:
In:
Gene Symbol & Name
Gene Accession
Chromosome No.
TO:Trait
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PO:Plant Growth and Development Stage
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With Phenotype
E.g.,
d1
,
dwarf-1
,
GR:0060184
,
flower*
,
*tillering stage*
Or
view help
Oryza sativa gene "PMS1" (GR:0060678)
Species
Oryza sativa (Rice)
[
GR_tax:013681
]
Accession
GR:0060678
Gene Symbol
PMS1
Gene Name
PHOTOPERIOD SENSITIVE GENIC MALE STERILITY 1
Synonyms (9)
pms1*
Pms1
photoperiod-sensitive male sterility-1
pgms
ms1-P
ms73
male sterile-73
ms73
male sterile-73
E.C. Numbers (0)
Pathway Reactions (0)
Chromosome No.
7
Gene Type
Not sequenced
Has Phenotype
yes
Description
under curation
Alleles (0)
Germplasm (0)
Sequences (0)
Gene-To-Gene Interactions (0)
Gene Interactions (0)
Map Positions (2)
Oryza sativa (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Cornell SSR 2001
BNL6.32
7
26.6-33.6cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Oryza sativa x Oryza longistaminata (1)
Map Type
Map Set
Name
Map
Position
Ext. Links
Genetic
Cornell RFLP 2001
BNL6.32
7
23.4-30.4cM
View Comparative Map
Details
Date Created
Mapping Method:
Comments
CMap Preview
Gene Map Positions (2)
Map Position
[ View in Marker DB ]
#
Map Set Name
Linkage Group
Start Position
Stop Position
CMap Feature Acc
1
Cornell RFLP 2001
7
23.4 cM
30.4 cM
cu-sl-2001-7-ip2
2
Cornell SSR 2001
7
26.6 cM
33.6 cM
cu-dh-2001-7-ip1
Associated Ontologies (6)
Trait
genic male sterility-photoperiod sensitive
(TO:0000009)
Plant Structure
flower
(PO:0009046)
, anther
(PO:0009066)
Plant Growth and Development Stage
whole plant flowering stage
(PO:0007016)
Biological Process
multicellular organismal development
(GO:0007275)
, photoperiodism
(GO:0009648)
Associated QTL (2)
Species
Accession
Trait Symbol
Trait Name
Evidence
Oryza sativa
AQBW003
PPDSNGMS
photoperiod sensitive genic male sterility
Mei-M-H et al., 1999
(
IAGP
)
Oryza sativa
AQBW004
PPDSNGMS
photoperiod sensitive genic male sterility
Mei-M-H et al., 1999
(
IAGP
)
Database Cross-References (1)
Oryzabase:
792
Literature (15)
Zhu-Y-G, Yu-J-H., "Stability and inheritance of photoperiod-sensitive genic male sterility in rice",
Proc. 6th Internat. Congress of SABRAO. II. Iyama-S, Takeda-G (eds.)
, 1989, pp. 745-748
Wang-X, Wang-M, Mei-G, Wu-H, Duan-W, Wang-W., "Photoperiod-conditioned male sterilty and its inheritance in rice",
Rice Genetics, II. IRRI, Manila, Philippines
, 1991, pp. 217-226
Shao-Y, Tang-X-H., "Analysis of restorer genes for photoperiod sensitive male-sterile rice",
Rice Genetics Newsletter
, 1992, vol. 9, pp. 52-54
Yuan-S-C, Zhang-Z-G, He-H-H, Zen-H-L, Lu-K-Y, Lian-J-H, Wang-B-X., "2 photoperiodic-reactions in photoperiod-sensitive genic male-sterile rice",
Crop Science
, 1993, vol. 33, pp. 651-660
Zhang-A-F, Shen-B-S, Dai-X-K, Mei-M-H, Saghai-Maroof-M-A, Li-Z-B., "An RFLP-based genetic analysis of photoperiod sensitive male sterility in rice",
Rice Genetics Newsletter
, 1993, vol. 10, pp. 94-97
Zhang-Q, Shen-B-Z, Dai-X-K, Mei-M-H, Saghai_Maroof-M-A, Li-Z-B., "Using bulked extremes and recessive class to map genes for photoperiod- sensitive genic male sterility in rice",
Proceedings of the National Academy of Sciences of the United States of America
, 1994, vol. 91, pp. 8675-8679
Shao-Y, Tang-X-H., "Allelic relation between photoperiod-sensitive genic male-sterility and cytoplasmic-genic male sterility of BT type in rice",
Rice Genetics Newsletter
, 1995, vol. 12, pp. 231-232
Bi-X-Z, Xiao-Y-H, Tao-Y-B., "Leaf proteins of PGMR during photoperiod-sensitive stage of fertility transformation",
Rice Genetics Newsletter
, 1997, vol. 14, pp. 87-90
Huang-N, Parco-A, Mew-T, Magpantay-G, McCouch-S-R, Guiderdoni-E, Xu-J, Subudhi-P, Angeles-E-R, Khush-G-S, Xu-J-C., "RFLP mapping of isozymes, RAPD and QTLs for grain shape, brown planthopper resistance in a doubled haploid rice population",
Mol Breed
, 1997, vol. 3, pp. 105-113
Yang-Z., "Inheritance of photoperiod sensitive genic male sterility and breeding of photoperiod sensitive genic male-sterile lines in rice (Oryza sativa L.) through anther culture",
Euphytica
, 1997, vol. 94, pp. 93-99
Wang-C, Tang-S, Tang-Y., "Effects of male sterile cytoplasm on yield and agronomic characters in Japonica hybrid rice, Oryza sativa L",
Breed Sci
, 1998, vol. 48, pp. 263-271
He-Y-Q, Yang-J, Xu-C-G, Zhang-Z-G, Zhang Q., "Genetic bases of instability of male sterility and fertility reversibility in photoperiod-sensitive genic male-sterile rice",
Theoretical and applied genetics
, 1999, vol. 99, pp. 683-693
Liu-N, Shan-Y, Wang-F-P, Xu-C-G, Peng-K-M, Li-X-H, Zhang-Q., "Identification of an 85-kb DNA fragment containing pms1, a locus for photoperiod-sensitive genic male sterility in rice",
Mol Genet Genomics
, 2001, vol. 266, pp. 271-275
Liu-Y-S, Zhu-L-H, Sun-J-S, Chen-Y., "Mapping QTLs for defective female gametophyte development in an inter-subspecific cross in Oryza sativa L",
Theoretical and applied genetics
, 2001, vol. 102(8), pp. 1243-1251
Liu-N, Shan-Y, Wang-F-P, Xu-C-G, Peng-K-M, Li-X-H, Zhang-Q., "Identification of an 85-kb DNA fragment containing pms1, a locus for photoperiod- sensitive genic male sterility in rice",
Mol. Genet. Genomics
, 2001, vol. 266, pp. 271-275
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