Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||
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Accession | GR:0020003 | ||
Gene Symbol | bierf3 | ||
Gene Name | BTH-induced ERF transcriptional factor 3 | ||
Synonyms (2) |
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E.C. Numbers (0) | |||
Pathway Reactions (0) | |||
Chromosome No. | 2 | ||
Gene Type | CDS (Protein coding) | ||
Has Phenotype | yes | ||
Description | Ethylene responsive class I transcription factor. bierf3 has increased expression when subjected to chemical activators of plant disease resistance responses; being induced by both benzothiadiazole and Salicyclic acid; it is also induced by cold and wounding. | ||
Curator Comment | bierf3 encodes a protein of 303 amino acids, with a calculated weight of 31.6 kDA. |
Protein |
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Nucleotide (DNA) |
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 26,416,313-26,417,616bp | View Comparative Map | |||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | Rice japonica MSU6 | Chr. 2 | 26416313 bp | 26417616 bp | grjp2009a-2-GR:0020003 |
Trait | abiotic stress trait (TO:0000168) |
Plant Growth and Development Stage | leaf production stage (PO:0007133) |
Cereal Plant Growth Stage | 02-seedling (GRO:0007047) |
Cellular Component | nucleus (GO:0005634) |
Molecular Function | sequence-specific DNA binding transcription factor activity (GO:0003700) |
Biological Process | regulation of transcription, DNA-dependent (GO:0006355), response to fungus (GO:0009620), secretion by cell (GO:0032940) |
Environment | Magnaporthe grisea (EO:0007226), growth chamber study (EO:0007269), unknown environment (EO:0007403) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
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chr2 | 26,416,313 | 26,417,616 | ~160K SNPs x 20 accessions (McNally 2... | 0 | |
chr2 | 26,416,313 | 26,417,616 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr2 | 26,416,313 | 26,417,616 | Huang X, et al, Nat Genetics 2010 Nov... | 4 | Search for SNPs |
chr2 | 26,416,313 | 26,417,616 | RiceDiversity 44K SNP assay, 34 trait... | 4 | Search for SNPs |
chr2 | 26,416,313 | 26,417,616 | RiceDiversity 44K SNP assay, 34 trait... | 0 |