Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Gene families
Literature
Plant Compara
Pan-taxonomic Compara
- Gene Tree
- Orthologues
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
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External references
Supporting evidence
ID History
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Gramene is produced in collaboration with Ensembl Plants

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Gene: PIL2 AT3G62090

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Description

phytochrome interacting factor 3-like 2 [Source:NCBI gene (formerly Entrezgene);Acc:825382]

Gene Synonyms

phytochrome interacting factor 3-like 2, PHYTOCHROME-INTERACTING FACTOR 6, PIF6

Location

Chromosome 3: 22,988,547-22,990,709 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 67 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt	RefSeq	Flags
PIL2-201	AT3G62090.2	1805	363aa	AT3G62090.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A178VFI3 Q8L5W7	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
PIL2-202	AT3G62090.1	1680	346aa	AT3G62090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A654FJY0	-	-
PIL2-203	AT3G62090.3	1614	324aa	AT3G62090.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F4IX36	-	-
PIL2-204	AT3G62090.4	1189	341aa	AT3G62090.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1I9LRF0	-	-

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Pan-taxonomic Compara

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Genomic alignments (Not available)

Gene tree

Orthologues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data