Arabidopsis lyrata

Arabidopsis lyrata subsp. lyrata

About Arabidipsis lyrata

Arabidopsis lyrata is a small perenial outcrossing brassica that is distributed within Eastern Asia, Europe and Northwestern America. A close relative of the dicot model, Arabidopsis thaliana, Arabidopsis lyrata has a genome size that is 1.5x larger with a haploid chromosme number of 8.

More information and statistics

View karyotype Example region

Genome assembly: v.1.0

More information and statistics

Download DNA sequence (FASTA)

Example gene tree

Comparative genomics

What can I find? Homologues, gene trees, and whole genome alignments across multiple species.

More about comparative analysis

Download alignments (EMF)

Example gene Example transcript

Gene annotation

What can I find? Protein-coding and non-coding genes, splice variants, cDNA and protein sequences, non-coding RNAs.

More about this genebuild

Download genes, cDNAs, ncRNA, proteins (FASTA)

Update your old Ensembl IDs

Variation

This species currently has no variation database. However you can process your own variants using the Variant Effect Predictor:

Variant Effect Predictor

Gramene/Ensembl Genomes Annotation

Additional annotations generated by the Gramene/Ensembl Genomes projects include:
  • The standard set of Gramene analyses detailed here.