Days to heading is an important agronomic trait of rice because it is
highly associated with the regional and seasonal adaptability of rice
cultivars. To identify genes controlling this trait, we developed a backcrossed
population (BC4F2) from a cross between the Japonica
rice variety Taichung 65, used as a recurrent parent, and the wild rice
Oryza glumaepatula Steud., (IRGC Acc. No. 105668) used as a donor
parent (Sobrizal et al. 1999). Two BC4F2
populations (BC4F2 254 and BC4F2
222) exhibiting a wide variation in days to heading were selected and
planted under natural daylength conditions in the paddy field of Kyushu
University Farm, Fukuoka, Japan. Seeds were sown on May 28, 1999 and transplanted
on June 28, 1999. Each plant was monitored for the appearance of the first
panicle. Days to heading was expressed as the number of days from sowing
to
heading. Eight leaves (ca. 10g) were collected from each plant, after
monitoring the heading date, for DNA extraction. One hundred six RFLP
markers showing polymorphism between O. glumaepatula and Taichung
65 were used for the whole genome survey in the BC3F1
generation. The retained heterozygous regions were further evaluated in
the BC4F1 generation (Fig. 1A).
The frequency distribution for days to heading of BC4F2
populations exhibited a bimodal distribution (Fig. 1B). The days to heading
of Taichung 65 varied from 95 to 100 days, while for BC4F2
254 and BC4F2 222 ranged from 95 to 114 and 94 to
111 days, respectively. O. glumaepatula did not flower during the
entire growing season under natural daylength condition, hence, no heading
data is presented. BC4F2 254 was classified into
20 early and 52 late heading individuals. This segregation agreed with
1 (early) : 3 (late) ratio (chi2=0.30), indicating that the
late heading was controlled by a single dominant gene from O. glumaepatula.
On the other hand, the segregation of 23 early and 55 late heading plants
in BC4F2 222 which agreed with 1:3 ratio (chi2=0.84)
was observed, indicating that the late heading was governed by a single
partially dominant gene from O. glumaepatula. F3 tests
supported the conclusion drawn from the F2 populations. The
two late heading genes identified in BC4F2 254 and
BC4F2 222 were tentatively designated as Lhd1(t)
and Lhd2(t), respectively. Linkage analysis of Lhd1(t) and
Lhd2(t) with RFLP markers in BC4F2 and BC4F3
revealed that Lhd1(t) was tightly linked to RFLP marker XNpb27
on chromosome 6, whereas Lhd2(t) was linked to RFLP markers C383
and C145 on chromosome 7 (Fig. 1C).
Lhd1(t) appears to be located on a position corresponding to Hd3a
(Yano et al. 1999), whereas the position of Lhd2(t) on chromosome
7 may be same as the region of the previously reported genes, E1
(Ichitani et al. 1998) and Hd4 (Yano et al. 1997).
This study was supported in part by Bio-oriented Technology Research Advancement
Institution (BRAIN), Japan.
References
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