Gramene Markers Statistics

Dbstat

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Markers Database Statistics

V26
Sept 2007 V25
June 2007 V24
March 2007 V23
November 2006 V22
September 2006 V21
May 2006 V20
March 2006 V19
October 2005

Markers By Marker Type

AFLP 8,150 8,150 8,150 8,039 1,230 950 950 950

BAC end sequence 850,566 676,959

Breakpoint Interval 303 303 303 303

Centromere 22 22 49 49 12 12

Clone 2,468,145 2,605,818 2,561,808 2,312,107 2,390,592 2,033,658 1,028,678 602,304

Deletion 333 895 895
EST 4,668,475 4,661,596 4,459,675 4,417,532 3,675,648 3,675,691 2,553,444 2,530,661

EST Cluster 1,325,126 1,325,127 1,325,127 1,325,127 1,325,059 1,325,059 614,790 601,935

FISH probe 34 31
FPC 16,446 22,651 22,651 19,339 1,701

Gene 11,761 9,806 9,764 9,321 8,673 8,474

Gene Model 96,234 96,234 95,297 57,753 57,501 57,503

Gene Primer 19 19 19 19 19 19 19 19

GSS 4,546,469 4,868,955 4,750,481 4,412,241 4,312,690 4,605,001 1,099,874

Insertion 310 686 686
maizebin 114 114 100 100

mRNA 149,917 142,278 142,037 99,536 98,737 99,054 97,823 91,074

Other_DNA 30,601
Overgo 2,494 25,006 16,964 16,496 15,575

Primer 21,482 21,482 5,398 4,206 62 34 34 34

qtl 11,538 11,437 11,210 10,962

RAPD 174 174 174 174 133 135 135 135

RFLP 17,743 17,744 17,739 17,718 19,643 7,822 10,366 7,791

SSR 17,106 11,437 14,762 14,748 16,885 16,835 16,835 16,835

SSR Primer Pair 16,920 16,883 16,883 16,884

STS 2,234 2,234 2,234 2,234 2,213 65 65 65

Tos17 18,023 18,023

Unclassified 31,524 31,524

Undefined 68,884 68,877 68,879 68,872 5,621 1,817 1,798 823

Markers By Species

Barley (Hordeum spp.) 688,385 682,030 681,567 638,042 637,879 535,720 535,720

Maize (Zea spp.) 4,663,898 4,630,429 4,590,524 4,044,148 3,365,983 2,622,201 1,089,433

Oat (Avena spp.) 9,176 8,840 8,836 8,232 8,226 8,214 8,215

Rice (Oryza spp.) 4,631,642 5,014,771 4,339,739 4,412,024 4,395,144 1,651,820 1,475,049

Rye (Secale spp.) 13,621 13,512 13,412 13,346 13,346 13,260 13,258

Sorghum (Sorghum spp.) 1,350,337 1,293,109 1,293,104 1,265,320 1,401,556 286,321 260,734

Sugarcane (Saccharum spp.) 340,047 340,032 340,021 339,661 339,661 339,657 339,647

Wheat (Triticum spp. + Aegilops spp.) 1,569,254 1,345,415 1,315,655 1,063,010 1,062,830 798,051 787,313

Other 237,822 233,735 230,903 148,316 129,009 38,146 38,045

Mappings on gt0506 TIGR Assembly

Chr. 1 3,055,148 4,606,148 4,547,505 4,521,755

Chr. 2 2,694,504 4,087,489 4,038,091 4,017,106

Chr. 3 2,952,458 4,332,052 4,271,553 4,247,474

Chr. 4 2,857,895 4,549,373 4,513,339 4,497,393

Chr. 5 2,671,745 4,208,084 4,168,525 4,153,507

Chr. 6 2,293,200 3,770,974 3,738,840 3,724,562

Chr. 7 2,573,959 4,108,341 4,071,478 4,057,685

Chr. 8 2,236,125 3,740,354 3,710,265 3,698,165

Chr. 9 2,117,042 3,484,222 3,463,343 3,454,027

Chr. 10 2,077,986 3,436,230 3,413,829 3,404,325

Chr. 11 1,932,453 3,281,030 3,253,010 3,243,624

Chr. 12 2,035,202 3,467,489 3,430,643 3,420,962

Chr. chloroplast 372 372 186

Chr. mitochondrion 211 209 108

None 5,905,866 5,986,329 4,688,177

No. Mappings Exported to CMap

AFLP 10,996 10,996 10,884

Breakpoint Interval 303 303 303

Centromere 168 168 168

Clone 2,472,665 2,115,894 1,780,232

deletion 333 895

EST 2,250,106 17,277 17,277

EST Cluster 346,141 811 811

FISH Probe 34
FPC 48,994 32,718 26,359

Gene 8,799 7,188 6,259

Gene Model 325,591 370,068 57,509

GSS 184,004 566 566

Insertion 308 683

Maize Bin 200 200 200

mRNA 255,294 39,692 39,692

OVERGO 180,255 149,154 164,275

Primer 1 1 1

QTL 17,877 16,624 16,376

RAPD 345 345 345

RFLP 72,762 72,767 72,710

SSR 58,680 58,457 58,237

STS 4,334 4,334 4,334

Undefined 9,525 9,697 9,645

Mappings on gt0506

Chr. 1 21,279 7,966 12,756 12,692

Chr. 2 18,098 6,403 10,303 10,234

Chr. 3 21,307 7,916 11,843 11,790

Chr. 4 13,830 4,514 8,767 8,712

Chr. 5 13,069 5,289 8,845 8,804

Chr. 6 12,244 4,925 8,607 8,559

Chr. 7 10,859 4,156 7,692 7,650

Chr. 8 9,828 3,817 7,187 7,143

Chr. 9 8,330 3,176 5,891 5,862

Chr. 10 7,935 2,811 5,704 5,683

Chr. 11 9,369 3,296 6,787 6,760

Chr. 12 7,745 3,175 6,567 6,537

Chr. chloroplast 190 190 192 137

Chr. mitochondrion 101 99 130 83

	V26 Sept 2007	V25 June 2007	V24 March 2007	V23 November 2006	V22 September 2006	V21 May 2006	V20 March 2006	V19 October 2005
Markers By Marker Type
AFLP	8,150	8,150	8,150	8,039	1,230	950	950	950
BAC end sequence							850,566	676,959
Breakpoint Interval	303	303	303	303
Centromere	22	22	49	49	12	12
Clone	2,468,145	2,605,818	2,561,808	2,312,107	2,390,592	2,033,658	1,028,678	602,304
Deletion	333	895	895
EST	4,668,475	4,661,596	4,459,675	4,417,532	3,675,648	3,675,691	2,553,444	2,530,661
EST Cluster	1,325,126	1,325,127	1,325,127	1,325,127	1,325,059	1,325,059	614,790	601,935
FISH probe	34	31
FPC	16,446	22,651	22,651	19,339	1,701
Gene	11,761	9,806	9,764	9,321	8,673	8,474
Gene Model	96,234	96,234	95,297	57,753	57,501	57,503
Gene Primer	19	19	19	19	19	19	19	19
GSS	4,546,469	4,868,955	4,750,481	4,412,241	4,312,690	4,605,001	1,099,874
Insertion	310	686	686
maizebin	114	114	100	100
mRNA	149,917	142,278	142,037	99,536	98,737	99,054	97,823	91,074
Other_DNA			30,601
Overgo	2,494	25,006	16,964	16,496	15,575
Primer	21,482	21,482	5,398	4,206	62	34	34	34
qtl	11,538	11,437	11,210	10,962
RAPD	174	174	174	174	133	135	135	135
RFLP	17,743	17,744	17,739	17,718	19,643	7,822	10,366	7,791
SSR	17,106	11,437	14,762	14,748	16,885	16,835	16,835	16,835
SSR Primer Pair	16,920	16,883	16,883	16,884
STS	2,234	2,234	2,234	2,234	2,213	65	65	65
Tos17							18,023	18,023
Unclassified	31,524	31,524
Undefined	68,884	68,877	68,879	68,872	5,621	1,817	1,798	823
Markers By Species
Barley (Hordeum spp.)	688,385		682,030	681,567	638,042	637,879	535,720	535,720
Maize (Zea spp.)	4,663,898		4,630,429	4,590,524	4,044,148	3,365,983	2,622,201	1,089,433
Oat (Avena spp.)	9,176		8,840	8,836	8,232	8,226	8,214	8,215
Rice (Oryza spp.)	4,631,642		5,014,771	4,339,739	4,412,024	4,395,144	1,651,820	1,475,049
Rye (Secale spp.)	13,621		13,512	13,412	13,346	13,346	13,260	13,258
Sorghum (Sorghum spp.)	1,350,337		1,293,109	1,293,104	1,265,320	1,401,556	286,321	260,734
Sugarcane (Saccharum spp.)	340,047		340,032	340,021	339,661	339,661	339,657	339,647
Wheat (Triticum spp. + Aegilops spp.)	1,569,254		1,345,415	1,315,655	1,063,010	1,062,830	798,051	787,313
Other	237,822		233,735	230,903	148,316	129,009	38,146	38,045
Mappings on gt0506 TIGR Assembly
Chr. 1	3,055,148	4,606,148		4,547,505	4,521,755
Chr. 2	2,694,504	4,087,489		4,038,091	4,017,106
Chr. 3	2,952,458	4,332,052		4,271,553	4,247,474
Chr. 4	2,857,895	4,549,373		4,513,339	4,497,393
Chr. 5	2,671,745	4,208,084		4,168,525	4,153,507
Chr. 6	2,293,200	3,770,974		3,738,840	3,724,562
Chr. 7	2,573,959	4,108,341		4,071,478	4,057,685
Chr. 8	2,236,125	3,740,354		3,710,265	3,698,165
Chr. 9	2,117,042	3,484,222		3,463,343	3,454,027
Chr. 10	2,077,986	3,436,230		3,413,829	3,404,325
Chr. 11	1,932,453	3,281,030		3,253,010	3,243,624
Chr. 12	2,035,202	3,467,489		3,430,643	3,420,962
Chr. chloroplast	372	372			186
Chr. mitochondrion	211	209			108
None	5,905,866	5,986,329			4,688,177
No. Mappings Exported to CMap
AFLP	10,996		10,996	10,884
Breakpoint Interval	303		303	303
Centromere	168		168	168
Clone	2,472,665		2,115,894	1,780,232
deletion	333		895
EST	2,250,106		17,277	17,277
EST Cluster	346,141		811	811
FISH Probe	34
FPC	48,994		32,718	26,359
Gene	8,799		7,188	6,259
Gene Model	325,591		370,068	57,509
GSS	184,004		566	566
Insertion	308		683
Maize Bin	200		200	200
mRNA	255,294		39,692	39,692
OVERGO	180,255		149,154	164,275
Primer	1		1	1
QTL	17,877		16,624	16,376
RAPD	345		345	345
RFLP	72,762		72,767	72,710
SSR	58,680		58,457	58,237
STS	4,334		4,334	4,334
Undefined	9,525		9,697	9,645

Mappings on gt0506
Chr. 1	21,279	7,966	12,756	12,692
Chr. 2	18,098	6,403	10,303	10,234
Chr. 3	21,307	7,916	11,843	11,790
Chr. 4	13,830	4,514	8,767	8,712
Chr. 5	13,069	5,289	8,845	8,804
Chr. 6	12,244	4,925	8,607	8,559
Chr. 7	10,859	4,156	7,692	7,650
Chr. 8	9,828	3,817	7,187	7,143
Chr. 9	8,330	3,176	5,891	5,862
Chr. 10	7,935	2,811	5,704	5,683
Chr. 11	9,369	3,296	6,787	6,760
Chr. 12	7,745	3,175	6,567	6,537
Chr. chloroplast	190	190	192	137
Chr. mitochondrion	101	99	130	83

Last modified: Thu Sep 27 13:49:00 2007