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expand all sections collapse all sections  Oryza sativa QTL "AQFY001" (days to heading)
QTL Accession ID AQFY001
Species Oryza sativa (Rice) [ GR_tax:013681 ]
Trait Symbol DTHD
Trait Name days to heading
Published Symbol Hd6
Trait Synonym(s)
Trait Category Development
Chromosome 3
Comments Linkage analysis with P1-derived artificial chromosome clone-derived DNA markers delimited Hd6 to a 26.4-kb genomic region. A gene encoding the alpha subunit of protein kinase CK2 (CK2 alpha) was identified in this region. The Nipponbare allele of CK2 alpha contains a premature stop codon, and the resulting truncated product is undoubtedly nonfunctional. Genetic complementation analysis revealed that the Kasalath allele of CK2 alpha increases days-to-heading.
toggle section  Map Positions (2)
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toggle section  Associated Ontologies (7)
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toggle section  SNPs (566)