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Sorghum bicolor protein "C5WM17" (Putative uncharacterized protein Sb01g009460) | Accession | C5WM17 | ||
|---|---|---|---|
| Species | Sorghum bicolor [ GR_tax:014159 ] | ||
| Name | Putative uncharacterized protein Sb01g009460 | ||
| Symbol | Sb01g009460 | ||
| Synonyms (1) | SORBIDRAFT_01g009460 | ||
| E.C. Numbers (0) | None | ||
| Gene Names (2) |
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| Organelle | Not available | ||
| Best Hits To TIGR Rice Gene Models (0) | None | ||
| IRGSP/RAP Genes (0) | None | ||
| Source | TREMBL | ||
| GenBank Accessions (1) | EER90949 | ||
| UniProt Accession (Sequence) | C5WM17 | ||
| Cultivar | None. |
Associated Ontologies (8) | Term Type | Term | Reference | Evidence | |||||
|---|---|---|---|---|---|---|---|---|
| Molecular Function | DNA binding (GO:0003677) | Jaiswal-P et al., 2003 |
| |||||
| transcription regulator activity (GO:0030528) | Jaiswal-P et al., 2003 |
| ||||||
| sequence-specific DNA binding (GO:0043565) | Jaiswal-P et al., 2003 |
| ||||||
| sequence-specific DNA binding transcription factor activity (GO:0003700) | Jaiswal-P et al., 2003 |
| ||||||
| Biological Process | regulation of transcription, DNA-dependent (GO:0006355) | Jaiswal-P et al., 2003 |
| |||||
| GO:0045449 (GO:0045449) | Jaiswal-P et al., 2003 |
| ||||||
| Cellular Component | nucleus (GO:0005634) | Jaiswal-P et al., 2003 |
| |||||
| plastid (GO:0009536) | Jaiswal-P et al., 2002 | IEA |
Keywords (3) Similarity to Other Proteins (22) | Viridiplantae Green plants -Embryophytes (plants) -Magnoliophytes (flowering plants) -Monocots | Grasses | Rice | Maize | Sorghum | Wheat | Barley | Rye | Oat | Sugarcane -Dicots | Brassicaceae | Arabidopsis | Fabaceae (Legumes) | Solanaceae | Cucurbitaceae |
| Others : Fungi | Metazoa |
| 3D protein structures : BLink from NCBI |
Protein Features (10) | Pfam (Info) | PF00046; homeobox | All Members of this Family | |
|---|---|---|---|
| PF03789; ELK | All Members of this Family | ||
| PF03790; KNOX1 | All Members of this Family | ||
| PF03791; KNOX2 | All Members of this Family | ||
| Prosite (Info) | PS00027; HOMEOBOX_1 | Sequence info. not available All Members of this Family |
|
| PS50071; HOMEOBOX_2 | Sequence info. not available All Members of this Family |
||
| PS51213; ELK | Sequence info. not available All Members of this Family |
||
| Physio-chemical features | C5WM17 | ||
| ProtoMap (Info) | C5WM17_SORBI | ||
| Feature Type | Residues (From - To) | Evidence | |
| Signal peptide | 1 - 56 | Jaiswal-P et al., 2002 | |
Database Cross-References (0)
