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Sorghum bicolor protein "C5XRF0" (Putative uncharacterized protein Sb03g041720) | Accession | C5XRF0 | ||
|---|---|---|---|
| Species | Sorghum bicolor [ GR_tax:014159 ] | ||
| Name | Putative uncharacterized protein Sb03g041720 | ||
| Symbol | Sb03g041720 | ||
| Synonyms (1) | SORBIDRAFT_03g041720 | ||
| E.C. Numbers (0) | None | ||
| Gene Names (2) |
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| Organelle | Not available | ||
| Best Hits To TIGR Rice Gene Models (0) | None | ||
| IRGSP/RAP Genes (0) | None | ||
| Source | TREMBL | ||
| GenBank Accessions (1) | EES03984 | ||
| UniProt Accession (Sequence) | C5XRF0 | ||
| Cultivar | None. |
Associated Ontologies (10) | Term Type | Term | Reference | Evidence | ||||
|---|---|---|---|---|---|---|---|
| Molecular Function | DNA binding (GO:0003677) | Jaiswal-P et al., 2003 |
| ||||
| ATP binding (GO:0005524) | Jaiswal-P et al., 2003 |
| |||||
| chromatin binding (GO:0003682) | Jaiswal-P et al., 2003 |
| |||||
| helicase activity (GO:0004386) | Jaiswal-P et al., 2003 |
| |||||
| ATP-dependent helicase activity (GO:0008026) | Jaiswal-P et al., 2003 |
| |||||
| nucleic acid binding (GO:0003676) | Jaiswal-P et al., 2003 |
| |||||
| Biological Process | chromatin assembly or disassembly (GO:0006333) | Jaiswal-P et al., 2003 |
| ||||
| Cellular Component | nucleus (GO:0005634) | Jaiswal-P et al., 2003 |
| ||||
| chromatin (GO:0000785) | Jaiswal-P et al., 2003 |
| |||||
| mitochondrion (GO:0005739) | Jaiswal-P et al., 2002 | IEA |
Keywords (1) Similarity to Other Proteins (22) | Viridiplantae Green plants -Embryophytes (plants) -Magnoliophytes (flowering plants) -Monocots | Grasses | Rice | Maize | Sorghum | Wheat | Barley | Rye | Oat | Sugarcane -Dicots | Brassicaceae | Arabidopsis | Fabaceae (Legumes) | Solanaceae | Cucurbitaceae |
| Others : Fungi | Metazoa |
| 3D protein structures : BLink from NCBI |
Protein Features (10) | Pfam (Info) | PF00271; helicase_C | All Members of this Family | |
|---|---|---|---|
| PF00385; chromo | All Members of this Family | ||
| PF00176; SNF2_N | All Members of this Family | ||
| Prosite (Info) | PS00690; DEAH_ATP_HELICASE | Sequence info. not available All Members of this Family |
|
| PS50013; CHROMO_2 | Sequence info. not available All Members of this Family |
||
| PS51192; HELICASE_ATP_BIND_1 | Sequence info. not available All Members of this Family |
||
| PS51194; HELICASE_CTER | Sequence info. not available All Members of this Family |
||
| Physio-chemical features | C5XRF0 | ||
| ProtoMap (Info) | C5XRF0_SORBI | ||
| Feature Type | Residues (From - To) | Evidence | |
| Signal peptide | 1 - 6 | Jaiswal-P et al., 2002 | |
Database Cross-References (0)
