Accession | Q40603 |
---|---|
Species | Oryza longistaminata [ GR_tax:013669 ] |
Name | Transcriptional activator Ra homolog |
Symbol | Not available |
Synonyms (0) | |
E.C. Numbers (0) | None |
Gene Names (1) | RA (TRANSCRIPTIONAL ACTIVATOR A) |
Organelle | Not available |
Best Hits To TIGR Rice Gene Models (0) | None [ Click here to generate a BLASTP query ] |
IRGSP/RAP Genes (0) | None |
Source | TREMBL |
GenBank Accessions (1) | AAC49214 |
UniProt Accession (Sequence) | Q40603 |
Cultivar | None. |
Comment | One rice R gene. An active homologue with extensive homology with other R genes. Located at a position on chromosome 4 previously shown to be in synteny with regions of maize chromosomes 2 and 10 that contain the B and R loci, respectively. Ra gene can activate the anthocyanin pathway. (Imported from Gene GR:0060719) |
Term Type | Term | Reference | Evidence |
---|---|---|---|
Biological Process | flavonoid metabolic process (GO:0009812) | Jaiswal-P et al., 2006 | IC |
Plant Structure | seed coat (PO:0009088) | Jaiswal-P et al., 2006 | IC |
endosperm (PO:0009089) | Jaiswal-P et al., 2006 | IC | |
Plant Growth and Development Stage | whole plant fruit formation stage (PO:0007042) | Jaiswal-P et al., 2006 | IC |
whole plant fruit ripening complete stage (PO:0007038) | Jaiswal-P et al., 2006 | IC | |
inflorescence emergence stage (PO:0007041) | Jaiswal-P et al., 2006 | IC | |
whole plant fruit ripening stage (PO:0007010) | Jaiswal-P et al., 2006 | IC | |
Trait | endosperm color (TO:0000487) | Jaiswal-P et al., 2006 | IC |
seed coat color (TO:0000190) | Jaiswal-P et al., 2006 | IC |
Viridiplantae Green plants -Embryophytes (plants) -Magnoliophytes (flowering plants) -Monocots | Grasses | Rice | Maize | Sorghum | Wheat | Barley | Rye | Oat | Sugarcane   -Dicots | Brassicaceae | Arabidopsis | Fabaceae (Legumes) | Solanaceae | Cucurbitaceae |
Others : Fungi | Metazoa |
3D protein structures : BLink from NCBI |
Pfam (Info) | PF00010; HLH | All Members of this Family | |
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Prosite (Info) | PS50888; HLH_2 | Sequence info. not available All Members of this Family |
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Physio-chemical features | Q40603 | ||
ProtoMap (Info) | Q40603_ORYLO | ||
Feature Type | Residues (From - To) | Evidence | |
Signal peptide | 1 - 94 | Jaiswal-P et al., 2002 |