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Oryza sativa (indica cultivar-group) protein "A2YN12" (geranylgeranyl-diphosphate synthase 1) | Accession | A2YN12 | ||
|---|---|---|---|
| Species | Oryza sativa (indica cultivar-group) [ GR_tax:013682 ] | ||
| Name | geranylgeranyl-diphosphate synthase 1 | ||
| Symbol | GGPR1 | ||
| Synonyms (2) |
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| E.C. Numbers (1) | 2.5.1.29 | ||
| Gene Names (1) | GGPR1 (geranylgeranyl-diphosphate synthase 1) | ||
| Organelle | Not available | ||
| Best Hits To TIGR Rice Gene Models (0) | None [ Click here to generate a BLASTP query ] | ||
| IRGSP/RAP Genes (1) | Os07g0580900 | ||
| Source | TREMBL | ||
| GenBank Accessions (1) | EAZ04473 | ||
| UniProt Accession (Sequence) | A2YN12 | ||
| Cultivar | None. | ||
| Comment | The gene encodes for the enzyme geranylgeranyl-diphosphate synthase. It catalyzes the first step of the diterpene phytoalexin pathay by conversting trans,trans-farnesyl diphosphate + isopentenyl diphosphate into diphosphate + geranylgeranyl diphosphate. (Imported from Gene GR:0101310) |
Associated Ontologies (4) | Term Type | Term | Reference | Evidence |
|---|---|---|---|
| Molecular Function | farnesyltranstransferase activity (GO:0004311) | Jaiswal-P et al., 2006 | IC |
| Biological Process | diterpene phytoalexin metabolic process (GO:0051501) | Jaiswal-P et al., 2006 | IC |
| Cellular Component | membrane (GO:0016020) | Jaiswal-P et al., 2004 | IEA |
| mitochondrion (GO:0005739) | Jaiswal-P et al., 2002 | IEA |
Keywords (1) Similarity to Other Proteins (22) | Viridiplantae Green plants -Embryophytes (plants) -Magnoliophytes (flowering plants) -Monocots | Grasses | Rice | Maize | Sorghum | Wheat | Barley | Rye | Oat | Sugarcane -Dicots | Brassicaceae | Arabidopsis | Fabaceae (Legumes) | Solanaceae | Cucurbitaceae |
| Others : Fungi | Metazoa |
| 3D protein structures : BLink from NCBI |
Protein Features (8) | Pfam (Info) | PF00348; polyprenyl_synt | All Members of this Family | |
|---|---|---|---|
| Prosite (Info) | PS00444; POLYPRENYL_SYNTHET_2 | Sequence info. not available All Members of this Family |
|
| PS00723; POLYPRENYL_SYNTHET_1 | Sequence info. not available All Members of this Family |
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| Physio-chemical features | A2YN12 | ||
| ProtoMap (Info) | A2YN12_ORYSA | ||
| Feature Type | Residues (From - To) | Evidence | |
| Signal peptide | 1 - 59 | Jaiswal-P et al., 2002 | |
| Transmembrane | 15 - 34 | Jaiswal-P et al., 2004 | |
| Transmembrane | 41 - 63 | Jaiswal-P et al., 2004 | |
