ID | 86352 | ||
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Name | TBP1 (GENE SYMBOL) | ||
Synonyms (2) |
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GRAMENE GENE | GR:0101270 | ||
Type | Gene | ||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||
Germplasm | |||
Description | It encodes for the DNA-binding protein that specifically binds DNA with two or more duplex repeats TTTAGGG recognized as telomeric repeat sequence. It bears high homology to Myb-like DNA binding motif present at the C-terminus. It is expressed ubiquitously. The protein is involved in negative regulation of telomere length and positive regulation of telomere stability. The phenotypes include telomere dysfunction, structural defects in vegetative and reproductive organs and formation of bridged chromosomes in pollen mother cells during anaphase. |
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Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | GR:0101270 |
Chromosome | 2 |
Has Phenotype | no |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 35,080,218-35,084,790 bp | View Comparative Map | |||
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Term Type | Term Name | Term Accession | |
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Cellular Component | chromosome, telomeric region | GO:0000781 | Search |
Molecular Function | DNA binding | GO:0003677 | Search |
Molecular Function | double-stranded telomeric DNA binding | GO:0003691 | Search |
Cellular Component | nucleus | GO:0005634 | Search |
Cellular Component | mitochondrion | GO:0005739 | Search |
Biological Process | meiotic anaphase I | GO:0007133 | Search |
Biological Process | regulation of telomere maintenance | GO:0032204 | Search |
Cereal Plant Growth Stage | 01-germination | GRO:0007043 | Search |
Cereal Plant Growth Stage | 02-seedling | GRO:0007047 | Search |
Cereal Plant Growth Stage | stamen stage ST5-6 | GRO:0007222 | Search |
Plant Structure | stamen | PO:0009029 | Search |
Plant Structure | spikelet | PO:0009051 | Search |
Plant Structure | microsporocyte | PO:0020047 | Search |
Plant Structure | root cap | PO:0020123 | Search |
Trait | plant height | TO:0000207 | Search |
Trait | inflorescence anatomy and morphology trait | TO:0000373 | Search |
Trait | germination rate | TO:0000430 | Search |
Trait | mitotic cell cycle trait | TO:0000730 | Search |