ID | 86199 | ||
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Name | Atg4 (GENE SYMBOL) | ||
Synonyms (2) |
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GRAMENE GENE | GR:0101172 | ||
Type | Gene | ||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||
Germplasm | |||
Description | Autophagy pathway is a highly regulated process for bulk degradation of proteins and organelles. Autophagy is shown to be essential for differentiation, development and cellular maintenance. ATG4 protein interacts with the ATG8 protein encoded by Atg8 gene (GR:0101172) and is involved in its post- translational modification. ATG4 is a cysteine protease. It is an ortholog of Arabidopsis thaliana gene APG4B/ATG4B (AT3G59950). |
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Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | GR:0101172 |
Chromosome | 4 |
Has Phenotype | no |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 4 | 34,631,535-34,634,977 bp | View Comparative Map | |||
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Term Type | Term Name | Term Accession | |
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Molecular Function | protein binding | GO:0005515 | Search |
Cellular Component | cytoplasm | GO:0005737 | Search |
Cellular Component | vacuolar lumen | GO:0005775 | Search |
Cellular Component | autophagic vacuole | GO:0005776 | Search |
Biological Process | autophagy | GO:0006914 | Search |
Molecular Function | cysteine-type carboxypeptidase activity | GO:0016807 | Search |
Molecular Function | APG8-specific protease activity | GO:0019786 | Search |
Cereal Plant Growth Stage | 02-seedling | GRO:0007047 | Search |
Cereal Plant Growth Stage | vegetative lag phase | GRO:0007146 | Search |
Plant Growth and Development Stage | late whole plant fruit ripening stage | PO:0007050 | Search |
Plant Growth and Development Stage | LP.02 two leaves visible stage | PO:0007098 | Search |
Plant Structure | root | PO:0009005 | Search |
Plant Structure | vascular leaf | PO:0009025 | Search |
Plant Structure | inflorescence | PO:0009049 | Search |
Plant Structure | leaf sheath | PO:0020104 | Search |
Environment | field study | EO:0007256 | Search |