ID | 11837 | ||
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Name | C (GENE SYMBOL) | ||
Synonyms (2) |
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GENE SYMBOL | Cp | ||
GRAMENE GENE | GR:0060106 | ||
Type | Gene | ||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||
Germplasm | |||
Description | Occurrence of the anthocyanin color depends on the complementary action of the genes Cp (C) and Ap (A); Cp is the basic gene for the production of chromogen, and Ap exerts its activation effect on Cp and turns the chromogen into anthocyanin. A third gene, Pa (P) is necessary for the distribution of color in apiculus. Cp is considered to be responsible for the production of the precursor substances such as flavon or catechin. Cp.1 is one of alleles in Cp locus. The order of dominancy of alleles for that locus is: Cp.1 (C-Bs)>Cp.2 (C-B)> Cp.3 (C-Bp)> Cp.4 (C-Bt)> Cp.5 (C-Br)>= Cp.6 (C-Bd)>=Cp.7 (C-Bk)>=Cp.8 (C-Bc)>=Cp.9 (C-Bm). |
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Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | GR:0060106 |
Chromosome | 6 |
Has Phenotype | yes |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Hokkaido Morphological 2000 | BNL6.32 | 6 | 44-44 cM | View Comparative Map | |||
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JRGP RFLP 2000 | BNL6.32 | 6 | 0-31.2 cM | View Comparative Map | ||||
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Term Type | Term Name | Term Accession | |
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Biological Process | flavonoid metabolic process | GO:0009812 | Search |
Plant Structure | shoot internode | PO:0005005 | Search |
Plant Structure | leaf collar | PO:0006012 | Search |
Plant Structure | lemma awn | PO:0006032 | Search |
Plant Structure | paleal apiculus | PO:0006033 | Search |
Plant Growth and Development Stage | whole plant fruit ripening complete stage | PO:0007038 | Search |
Plant Growth and Development Stage | sporophyte reproductive stage | PO:0007130 | Search |
Plant Growth and Development Stage | sporophyte vegetative stage | PO:0007134 | Search |
Plant Growth and Development Stage | floral organ development stage | PO:0007600 | Search |
Plant Structure | seed | PO:0009010 | Search |
Plant Structure | vascular leaf | PO:0009025 | Search |
Plant Structure | lemma | PO:0009037 | Search |
Plant Structure | palea | PO:0009038 | Search |
Plant Structure | leaf sheath | PO:0020104 | Search |
Trait | apiculus color | TO:0000140 | Search |
Trait | awn color | TO:0000141 | Search |
Trait | seed coat color | TO:0000190 | Search |
Trait | lemma and palea color | TO:0000264 | Search |
Trait | leaf color | TO:0000326 | Search |
Trait | leaf collar color | TO:0000364 | Search |
Trait | basal leaf sheath color | TO:0000367 | Search |
Trait | sterile lemma color | TO:0000400 | Search |
Trait | internode color | TO:0000426 | Search |