Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||
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Accession | GR:0060106 | ||||||
Gene Symbol | C | ||||||
Gene Name | CHROMOGEN FOR ANTHOCYANIN | ||||||
Synonyms (5) |
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E.C. Numbers (0) | |||||||
Pathway Reactions (0) | |||||||
Chromosome No. | 6 | ||||||
Gene Type | Not sequenced | ||||||
Has Phenotype | yes | ||||||
Description | Occurrence of the anthocyanin color depends on the complementary action of the genes Cp (C) and Ap (A); Cp is the basic gene for the production of chromogen, and Ap exerts its activation effect on Cp and turns the chromogen into anthocyanin. A third gene, Pa (P) is necessary for the distribution of color in apiculus. Cp is considered to be responsible for the production of the precursor substances such as flavon or catechin. Cp.1 is one of alleles in Cp locus. The order of dominancy of alleles for that locus is: Cp.1 (C-Bs)>Cp.2 (C-B)> Cp.3 (C-Bp)> Cp.4 (C-Bt)> Cp.5 (C-Br)>= Cp.6 (C-Bd)>=Cp.7 (C-Bk)>=Cp.8 (C-Bc)>=Cp.9 (C-Bm). |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Hokkaido Morphological 2000 | BNL6.32 | 6 | 44-44cM | View Comparative Map | |||
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JRGP RFLP 2000 | BNL6.32 | 6 | 0-31.2cM | View Comparative Map | ||||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | JRGP RFLP 2000 | 6 | 0 cM | 31.2 cM | jrgp-2000-6-ip22 |
2 | Hokkaido Morphological 2000 | 6 | 44 cM | 44 cM | morph-2000-6-12 |
Trait | apiculus color (TO:0000140), awn color (TO:0000141), seed coat color (TO:0000190), lemma and palea color (TO:0000264), leaf color (TO:0000326), leaf collar color (TO:0000364), basal leaf sheath color (TO:0000367), sterile lemma color (TO:0000400), internode color (TO:0000426) |
Plant Structure | shoot internode (PO:0005005), leaf collar (PO:0006012), lemma awn (PO:0006032), paleal apiculus (PO:0006033), seed (PO:0009010), vascular leaf (PO:0009025), lemma (PO:0009037), palea (PO:0009038), leaf sheath (PO:0020104) |
Plant Growth and Development Stage | whole plant fruit ripening complete stage (PO:0007038), sporophyte reproductive stage (PO:0007130), sporophyte vegetative stage (PO:0007134), floral organ development stage (PO:0007600) |
Biological Process | flavonoid metabolic process (GO:0009812) |