ID | 17642 |
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Name | RZ452 |
Synonyms (0) | None. |
Type | RFLP |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RZ452 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | seedling leaf |
Source Treatment | etiolated |
Vector | pBluescript SK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0.5 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
GGCTGCAGGAATTCGGCANGAGATTTTGAGTAACACACTGAGGCCACTAGTGCCAACTTCATGTAACCTGGAATGGAGGA
AACTGATGGAGCAGTGCTGGTCAACTGAACCTGAGCGACGACCTTCCTTCGCTGAAGTTGCAACCCGTCTTCGCTCCATG
CTAGAAGCAAGCCAAAGTGTGACTCTGCAGAGTTAATTAGCATCACTCTCTGTCTGTATATCTATCATTTAGGTGCATGC
TACAGAATTGCAAATATGAATGTTTCTTCTTATATTGAGTATCGCTTATAAGTATGCAATTGTATAACTCCTGCAGACCA
AAGCTGACTATCGGGTGCCCCCTGTCTTGTATTGTACATGCATGTATCCACAGCATGAAACCTGGTAGGGGGAAAAAGTA
AACAGAAGCTCCCTTATCTATGTGAAGATCTTTACACTTTAGTGGGGGGCCCGTGCCGAATTCGATATCCAAGCTTAATC
GATAACCGTCGACCTCCGAGGGGGGGGNCCGGGAACCCAATTCGNCCCAAAAAGTGGAGNCGNATTACAATTCACTGGGC
CGGCGGTTTAANAACGNCGGGACCTGGGNAANCCCTGGGGGTANCCAACTAAANGCCTGGAGGAAANCCCCTTTTGCAGC
NGGGGAAANGCGAANGGGCCGACCGGTGGCCTTCCAAAGTGGGCCCTNAAAGGGGATGGGAATTNAACGGGAAAATTTGG
AAAACCCGGGAAATTNGGAAAAANGCCCNTTTACANAANGGGGAACGGGAAACCCCTAANT
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 16,288,679-16,289,099 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 3 | 80.8-80.8 cM | View Comparative Map | |||
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Cornell V20A/Oruf QTL 1998 | BNL6.32 | 3 | 36-36 cM | View Comparative Map | ||||
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UCD Lab/Bla QTL 1998 | BNL6.32 | 3 | 101-101 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | Minnesota John/Dor F2 QTL 2000 | BNL6.32 | 3 | 124-124 cM | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Genetic | Cornell RFLP 1994 | BNL6.32 | 3 | 40.5-40.5 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 3 | 46.2-46.2 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQBS055 | qtl_marker |
Oryza sativa | QTL | AQEO001 | qtl_marker |
Oryza sativa | QTL | AQEO005 | qtl_marker |
Oryza sativa | QTL | AQEO009 | qtl_marker |
Oryza sativa | QTL | AQEO015 | qtl_marker |
Oryza sativa | QTL | AQEO018 | qtl_marker |
Oryza sativa | QTL | AQEP003 | qtl_marker |
Oryza sativa | QTL | AQEP004 | qtl_marker |
Oryza sativa | QTL | AQEP010 | qtl_marker |
Oryza sativa | QTL | AQEP012 | qtl_marker |
Oryza sativa | QTL | AQEP013 | qtl_marker |
Oryza sativa | QTL | AQFE071 | qtl_marker |
Oryza sativa | QTL | AQFE072 | qtl_marker |
Oryza sativa | QTL | AQFE073 | qtl_marker |
Oryza sativa | QTL | AQFE083 | qtl_marker |
Oryza sativa | QTL | AQFE086 | qtl_marker |
Oryza sativa | QTL | AQFE087 | qtl_marker |
Oryza sativa Indica Group | EST | AI096161 | related_sequence |
RZ452 SL Autorad: Survey blot of the probe RZ452 for the BS125/2/BS125/WLO2 population |