ID | 16502 | ||||||
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Name | C950 | ||||||
Synonyms (5) |
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Type | RFLP | ||||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||||
Germplasm | |||||||
Description | |||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | C950 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | callus |
Source Treatment | |
Vector | |
Vector Antibiotic Resistance | |
Fragment Size | |
Vector Excision Enzyme | SalI/NotI |
Vector Primers | |
Overgo1 | |
Overgo2 |
GCGCCGCTACTCCCCCCTCGCCGAGAGAGCTCTAGGGTTTCCGCTGCCGAATTTTTTTTTTTAATTCGGGGGGAGAGATT
TGAAGAGGCGGCACCATGTTGGTCTACCAGGATCTGCTTACCGGTGACGAGCTCCTGTCGGATTCGTTCCCCTACAGAGA
GATCGAGAACGGCATCCTCTGGGAAGTCGATGGCAAGTGGGTCGTTCAAGGAGCTATTGATGTGGACATTGGTGCCAACC
CATCTGCTGAGGGTGGTGGTGATGATGAGGGTGTTGATGACCAAGCTGTGAAGGTGGTCGACAATTGTGGACAACTTCCG
TCTNAAGGAGAAACCTCCTTTTGCAAAGAAGAAGTTTGTGACCTTAATGAGCGTANATAAGAACCTTTCCGCAAGCTGGA
TGCGGAAAGAAGAGAATTAAGA
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 11 | 26,040,019-26,041,524 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | JRGP RFLP 2000 | BNL6.32 | 11 | 110.1-110.1 cM | View Comparative Map | |||
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TTU CTIR 2000 | BNL6.32 | 11 | 115.4-115.4 cM | View Comparative Map | ||||
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QTL | AGEBC KDM105/CT999 RI QTL 2000 | BNL6.32 | 11b | 147.4-147.4 cM | View Comparative Map | |||
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CAU IRAT109/YUEFU QTL 2004 | BNL6.32 | 11a | 19.9-19.9 cM | View Comparative Map | ||||
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CNCAU Orufi/Gui2 BC1 QTL 2001 | BNL6.32 | 11 | 123.5-123.5 cM | View Comparative Map | ||||
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CNHZAU Pei/8902 QTL 1999 | BNL6.32 | 11 | 4.4-4.4 cM | View Comparative Map | ||||
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CNSIPPE Non/Kos QTL 2004 | BNL6.32 | 11 | 181.3-181.3 cM | View Comparative Map | ||||
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CTIR CT9993/IR6226 QTL 2000 | BNL6.32 | 11 | 115.4-115.4 cM | View Comparative Map | ||||
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IGCAS Jas85/Lem F2 QTL 2000 | BNL6.32 | 11 | 11.5-11.5 cM | View Comparative Map | ||||
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JKU Aso/IR24 QTL 1996 | BNL6.32 | 11 | 11.4-11.4 cM | View Comparative Map | ||||
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JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 11 | 110.1-110.1 cM | View Comparative Map | ||||
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JUT IR36/Genj QTL 2004 | BNL6.32 | 11 | 73.4-73.4 cM | View Comparative Map | ||||
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JUT Patnai/Goai F2 QTL 2004 | BNL6.32 | 11 | 119.3-119.3 cM | View Comparative Map | ||||
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MU CT9993/IR6226 QTL 2004 | BNL6.32 | 11 | 131.4-131.4 cM | View Comparative Map | ||||
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NIAR PI312777/Rex F2 QTL 2001 | BNL6.32 | 11 | 0-0 cM | View Comparative Map | ||||
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NIAS Sas/Hab BCIL QTL 2003 | BNL6.32 | 11 | 57.8-57.8 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 11 | 119.6-119.6 cM | View Comparative Map | ||||
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TNCGEB CT9993/IR6226 QTL 2004 | BNL6.32 | 11 | 87.2-87.2 cM | View Comparative Map | ||||
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Zh97/Ming63 CNHZAU F2 QTL 1999 | BNL6.32 | 11 | 9.6-9.6 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | JIC 81B/ICMP 2004 | BNL6.32 | 1 | 19.5-20.9 cM | View Comparative Map | |||
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BNL6.32 | 4 | 32.8-38.3 cM | View Comparative Map | |||||
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BNL6.32 | 6 | 51.4-51.4 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | UM B100/A10 QTL 2004 | BNL6.32 | VIII | 113.9-113.9 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Huazhong RFLP 1997 | BNL6.32 | 11 | 125.1-125.1 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQAX002 | qtl_marker |
Oryza sativa | QTL | AQAX008 | qtl_marker |
Oryza sativa | QTL | AQCQ026 | qtl_marker |
Oryza sativa | QTL | AQCQ035 | qtl_marker |
Oryza sativa | QTL | AQDZ004 | qtl_marker |
Oryza sativa | QTL | AQEK003 | qtl_marker |
Oryza sativa | QTL | AQEK005 | qtl_marker |
Oryza sativa | QTL | AQEK014 | qtl_marker |
Setaria italica | QTL | AQET047 | qtl_marker |
Setaria italica | QTL | AQET057 | qtl_marker |
Setaria italica | QTL | AQET058 | qtl_marker |
Setaria italica | QTL | AQET060 | qtl_marker |
Oryza sativa | QTL | AQFP025 | qtl_marker |
Oryza sativa | QTL | AQFT033 | qtl_marker |
Oryza sativa | QTL | AQR007 | qtl_marker |
Oryza sativa | QTL | CQAD6 | qtl_marker |
Oryza sativa | QTL | CQH35 | qtl_marker |
Oryza sativa | QTL | CQE81 | qtl_marker |
Oryza sativa | QTL | CQY5 | qtl_marker |
Oryza sativa | QTL | CQN40 | qtl_marker |
Oryza sativa | QTL | CQN23 | qtl_marker |
Oryza sativa | QTL | CQN24 | qtl_marker |
Oryza sativa | QTL | CQN48 | qtl_marker |
Oryza sativa | QTL | CQN60 | qtl_marker |
Oryza sativa | QTL | CQN61 | qtl_marker |
Oryza sativa Japonica Group | EST | D22697 | related_sequence |