ID | 50617 |
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Name | CQF4 (QTL ACCESSION ) |
Synonyms (1) | CQF4-LFNICN |
TO TERM | TO:0000543 (leaf nitrogen content) |
Trait Name | leaf nitrogen content |
Trait Symbol | LFNICN |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | Total leaf nitrogen content was determined by CN-Corder (Yanaco Co. Japan) by using the leaf samples oven-dried at 80C for 3 days. The analysis was done on contents derived from leaf tissue collected 5 days after heading. The means of ten replications per line were used in the data analysis. Chromosomal locations of putative QTLs were determined by single-factor analysis (one-way ANOVA) with the general linear model procedure of QGENE. A probability level of 0.01 was used as the threshold for detecting significant differences at P < 0.005 in the mean values of the two genotypic classes, homozygous for Nipponbare and Kasalath alleles. The means of ten replications per line were used in the data analysis. Phenotypic effect contributed by Nipponbare allele. Chromosomal locations of putative QTLs were determined by single-factor analysis (one-way ANOVA) with the general linear model procedure of QGENE. A probability level of 0.01 was used as the threshold for detecting significant differences in the mean values of the two genotypic classes, homozygous for Nipponbare and Kasalath alleles. Leaf nitrogen contents were positively correlated with the soluble protein content (r=0.456; P<0.01) and Rubisco content (r=0.367; P<0.05). |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CQF4 |
Chromosome | 2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 435,819-3,480,270 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 2 | 2.5-15 cM | View Comparative Map | |||
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Term Type | Term Name | Term Accession | |
---|---|---|---|
Plant Structure | vascular leaf | PO:0009025 | Search |
Plant Growth and Development Stage | inflorescence emergence stage | PO:0007041 | Search |
Growth Stage | A-vegetative stage | GRO:0007139 | Search |
Growth Stage | B-reproductive stage | GRO:0007140 | Search |
Environment | unknown environment | EO:0007403 | Search |
Plant Growth and Development Stage | sporophyte reproductive stage | PO:0007130 | Search |
Plant Growth and Development Stage | sporophyte vegetative stage | PO:0007134 | Search |
Trait | leaf nitrogen content | TO:0000543 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |