ID | 17563 | ||||||||||
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Name | RZ995 (GRAINGENES PROBE) | ||||||||||
Synonyms (9) |
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Deprecated Gramene Marker Acc | 48584275 | ||||||||||
MAIZEGDB PROBE | p-rz995 | ||||||||||
Type | RFLP | ||||||||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||||||||
Germplasm | |||||||||||
Description | |||||||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RZ995 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | seedling leaf |
Source Treatment | etiolated |
Vector | pBluescript SK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0.9 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0131 |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 10,121,499-10,121,935 bp | View Comparative Map | |||
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BNL6.32 | Chr. 1 | 10,122,556-10,122,731 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | Aberdeen Bala/Azu QTL 2002 | BNL6.32 | 1 | 36.4-36.4 cM | View Comparative Map | |||
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UKUW Bala/Azu QTL 1997 | BNL6.32 | 1a | 66.1-66.1 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Composite 2004 | BNL6.32 | 6B | 87-87 cM | View Comparative Map | |||
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Cornell Synthetic/Opata 1995 | BNL6.32 | 6B | -30.5--30.5 cM | View Comparative Map | ||||
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QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 6B | -30.5--30.5 cM | View Comparative Map | |||
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Wheat composite QTL 2004 | BNL6.32 | 6R | 87-87 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Paterson 2003 | BNL6.32 | A | 54.7-54.7 cM | View Comparative Map | |||
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BNL6.32 | C | 60-60 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | BNL 1996 | BNL6.32 | 3 | 68.7-68.7 cM | View Comparative Map | |||
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Cornell Wilson 1999 | BNL6.32 | 3 | 42-42 cM | View Comparative Map | ||||
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BNL6.32 | 8 | 0-0 cM | View Comparative Map | |||||
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UMC 1998 | BNL6.32 | 3 | 61.3-61.3 cM | View Comparative Map | ||||
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BNL6.32 | 8 | 1.4-1.4 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 1 | 57.6-57.6 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 1 | 48.75-48.75 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQC002 | qtl_marker |
Oryza sativa | QTL | AQD024 | qtl_marker |
Oryza sativa | QTL | AQD027 | qtl_marker |
Oryza sativa | QTL | AQGJ017 | qtl_marker |
Oryza sativa | QTL | AQHE119 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 3.04 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 8.00 | bin_marker |
Oryza sativa | QTL | DQC2 | qtl_marker |
Oryza sativa | Probed Site | rz995a(fbp) | maizegdb_to_gramene |
Oryza sativa | Probed Site | rz995b(fbp) | maizegdb_to_gramene |
Oryza sativa Indica Group | EST | AA231827 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231879 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231827 | related_sequence |
Oryza sativa Indica Group | EST | AA231879 | related_sequence |
RZ995 BROWS Autorad: Survey blot of the probe RZ995 for the comparative barley/rice/oat/wheat/sugarcane project |