ID | 17675 |
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Name | RM122 |
Synonyms (1) | RM122(K) |
Type | SSR |
Species | Oryza sativa Japonica Group (Oryza sativa japonica) [ GR_tax:013684 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM122 |
Repeat Motif | (GA)7A(GA)2A(GA)11 |
Anneal Temperature | |
Expected PCR Product Size | 227 |
Sequence Source | |
Linkage Group | |
Remarks |
Gramene Literature | Wu-K-S, Tanksley-S-D, "Abundance, polymorphism and genetic mapping of microsatellites in rice", Molecular & General Genetics, 1993, vol. 241, pp. 225-235 |
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Gramene Diversity Rice Marker | 131 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 5 | 311,055-311,218 bp | View Comparative Map | |||
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BNL6.32 | Chr. 5 | 311,059-311,297 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | AGEBC KDM105/CT999 RI QTL 2000 | BNL6.32 | 5a | 0-0 cM | View Comparative Map | |||
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Brazil BG90-2/RS16 QTL 2002 | BNL6.32 | 5 | 2.2-2.2 cM | View Comparative Map | ||||
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CNHAU Zhen97/ H94 QTL 2005 | BNL6.32 | 5 | 2.3-2.3 cM | View Comparative Map | ||||
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CNHAU Zhenshan 97/IRAT109 SSR QTL 2006 | BNL6.32 | 5 | 0-0 cM | View Comparative Map | ||||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 5 | 3-3 cM | View Comparative Map | ||||
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CNNAU IR50/Tatsumimochi/Miyukimochi SSR QTL 2006 | BNL6.32 | 5 | 0-0 cM | View Comparative Map | ||||
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INDIR IR58025/O. rufipogon BC SSR QTL 2005 | BNL6.32 | 5 | 0-0 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 5 | 6.4-6.4 cM | View Comparative Map | ||||
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TTU IR64/Orufi RI QTL 2003 | BNL6.32 | 5 | 7.2-7.2 cM | View Comparative Map | ||||
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Zh97/Ming63 CNHZAU F2 QTL 1999 | BNL6.32 | 5 | 0-0 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 5 | -2.3--2.3 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 5 | 10.1-10.1 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQCQ097 | qtl_marker |
Oryza sativa | QTL | AQCQ099 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT17739 | equivalent_to |
Oryza sativa Japonica Group | SSR | MRG0182.RT0182 | equivalent_to |
Oryza sativa Japonica Group | Primer | RM122_forward | primer_forward |
Oryza sativa Japonica Group | Primer | RM122_reverse | primer_reverse |
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