ID | 50640 |
---|---|
Name | CQN8 (QTL ACCESSION ) |
Synonyms (1) | CQN8-GS1CN |
TO TERM | TO:0000305 (glutamine synthetase content) |
Trait Name | glutamine synthetase content |
Trait Symbol | GS1CN |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | Nearest marker loci is C777 on JRGP map. Positive allele effect contributed by Nipponbare. For assaying of Glutamine synthetase (GS1, EC:6.3.1.2) amount, the blade of leaf 9 was harvested after the emergence of leaf 11 from the sheath of leaf 10. The amounts were determined by densitometry of the western blots. Single marker regressions were used to detect the association between markers and each trait using qGENE software. Significant differences (P<0.05) in marker class means were interpreted as likely linkage of each trait to the marker locus. |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CQN8 |
Chromosome | 2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 18,225,635-20,143,437 bp | View Comparative Map | |||
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 2 | 59.2-80.5 cM | View Comparative Map | |||
|
Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | RFLP | C777 | qtl_marker |
Oryza sativa | RFLP | C796 | qtl_marker |
Oryza sativa | RFLP | E30164S | qtl_marker |
Oryza sativa | RFLP | G132 | qtl_marker |
Oryza sativa | RFLP | E30251S | qtl_marker |
Oryza sativa | RFLP | S1412 | qtl_marker |
Oryza sativa | RFLP | S2068 | qtl_marker |
Oryza sativa | RFLP | G1314 | qtl_marker |
Zea mays subsp. mays | RFLP | CSU100 | qtl_marker |
Term Type | Term Name | Term Accession | |
---|---|---|---|
Plant Structure | leaf lamina | PO:0020039 | Search |
Plant Growth and Development Stage | LP.11 eleven leaves visible stage | PO:0007116 | Search |
Growth Stage | 09-mature grain stage | GRO:0007045 | Search |
Environment | unknown environment | EO:0007403 | Search |
Plant Growth and Development Stage | whole plant fruit ripening complete stage | PO:0007038 | Search |
Plant Structure | seed | PO:0009010 | Search |
Trait | glutamine synthetase content | TO:0000305 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |