ID | 50639 |
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Name | CQN9 (QTL ACCESSION ) |
Synonyms (1) | CQN9-NADHGOGATCN |
TO TERM | TO:0000312 (NADH glutamate synthase content) |
Trait Name | nadh-dependent glutamate synthase content |
Trait Symbol | NADHGOGATCN |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | Nearest marker loci is R712 on JRGP map. Positive allele effect contributed by Nipponbare. For assaying NADH-dependent glutamate synthase (NADH-GOGAT, EC:1.4.1.14) amount, the proteins were extracted from non-green part of the leaf 11 and were. The amounts were determined by densitometry of the western blots. Single marker regressions were used to detect the association between markers and each trait using qGENE software. Significant differences (P<0.05) in marker class means were interpreted as likely linkage of each trait to the marker locus. |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | CQN9 |
Chromosome | 2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 2 | 7,537,374-18,249,617 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 2 | 36.3-59.2 cM | View Comparative Map | |||
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Term Type | Term Name | Term Accession | |
---|---|---|---|
Plant Structure | leaf lamina | PO:0020039 | Search |
Plant Growth and Development Stage | LP.11 eleven leaves visible stage | PO:0007116 | Search |
Growth Stage | 09-mature grain stage | GRO:0007045 | Search |
Environment | unknown environment | EO:0007403 | Search |
Plant Growth and Development Stage | whole plant fruit ripening complete stage | PO:0007038 | Search |
Plant Structure | seed | PO:0009010 | Search |
Trait | NADH glutamate synthase content | TO:0000312 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |