ID | 4826 | ||||||
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Name | RZ596 (GRAINGENES PROBE) | ||||||
Synonyms (5) |
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Deprecated Gramene Marker Acc | 48585119 | ||||||
Type | RFLP | ||||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||||
Germplasm | |||||||
Description | |||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RZ596 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | seedling leaf |
Source Treatment | etiolated |
Vector | pBluescript SK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.1 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 20,605,638-20,605,972 bp | View Comparative Map | |||
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BNL6.32 | Chr. 9 | 20,606,350-20,608,559 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | TTU IRIR 2000 | BNL6.32 | 9 | 124.2-124.2 cM | View Comparative Map | |||
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QTL | Cornell V20A/glab QTL 2004 | BNL6.32 | 9 | 39.6-39.6 cM | View Comparative Map | |||
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TTU IR58821/IR52561 QTL 2002 | BNL6.32 | 9 | 124.2-124.2 cM | View Comparative Map | ||||
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UKUW Bala/Azu QTL 1997 | BNL6.32 | 12 | 127.6-127.6 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | E | 108.2-108.2 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | JIC 81B/ICMP 2004 | BNL6.32 | 7 | 29.9-29.9 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 7 | 94-94 cM | View Comparative Map | |||
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IBM 2002 | BNL6.32 | 4 | 503.1-503.1 cM | View Comparative Map | ||||
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BNL6.32 | 7 | 307.2-307.2 cM | View Comparative Map | |||||
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BNL6.32 | 7 | 351.2-351.2 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 9 | 61.5-61.5 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 9 | 79.2-79.2 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Huazhong RFLP 1997 | BNL6.32 | 9 | 99.9-99.9 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQAL006 | qtl_marker |
Oryza sativa | QTL | AQAL013 | qtl_marker |
Oryza sativa | QTL | AQAL031 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 4.08 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 7.03 | bin_marker |
Triticum aestivum | Breakpoint Interval | C-5DL1-0.60 | Wheat-EST-BI |
Oryza sativa | Probed Site | rz596a | maizegdb_to_gramene |
Oryza sativa | Probed Site | rz596b | maizegdb_to_gramene |
Oryza sativa | Probed Site | rz596c | maizegdb_to_gramene |
Oryza sativa Indica Group | EST | AA231659 | related_sequence |
Oryza sativa Indica Group | EST | AA231817 | related_sequence |
Oryza sativa Indica Group | EST | AA231659 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231817 | contained_in_sequence |