![[Home Page]](/images/icons/gramene_logo180new.jpg "[Home Page]"){kind=icon}
Markers Home |
Markers Search |
Browse Map Sets |
SSR Markers Resource |
Microarray Probes |
Help |
Tutorial |
FAQs
Oryza sativa RFLP "RZ516"
| ID | 4775 | ||||
|---|---|---|---|---|---|
| Name | RZ516 (GRAINGENES PROBE) | ||||
| Synonyms (3) |
|
||||
| Deprecated Gramene Marker Acc | 48586936 | ||||
| Type | RFLP | ||||
| Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||
| Germplasm | |||||
| Description | |||||
| Tags () | None |
Source/Library
Details
| Marker Created: | |
|---|---|
| Marker Updated: | |
| Internal Marker Accession: | RZ516 |
| DNA Treatment | |
| Source Type | cDNA |
| Source Tissue | seedling leaf |
| Source Treatment | etiolated |
| Vector | pBluescript SK |
| Vector Antibiotic Resistance | Ampicillin |
| Fragment Size | 0.6 |
| Vector Excision Enzyme | EcoRI |
| Vector Primers | M13 forward/M13 reverse |
| Overgo1 | SOG0124 |
| Overgo2 |
Database Cross-References (3)
| Gramene Literature | Causse-M-A, Fulton-T-M, Cho-Y-G, Ahn-S-N, Chunwongse-J, Wu-K, Xiao-J, Yu-Z, Ronald-P-C, Harrington-S-E, Second-G, McCouch-S-R, Tanksley-S-D, "Saturated molecular map of the rice genome based on an interspecific backcross population", Genetics, 1994, vol. 138, pp. 1251-1274 |
|---|---|
| Gramene Diversity Rice Marker | 507 |
| Gramene Diversity Rice Marker | 854 |
Sequences (4)
Related Sequences (4)
Align All Sequences
Map Positions (26)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 6 | 2,560,318-2,560,544 bp | View Comparative Map | |||
|
||||||||
| BNL6.32 | Chr. 6 | 2,560,741-2,561,213 bp | View Comparative Map | |||||
|
||||||||
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | IGCN 1998 | BNL6.32 | 6 | 17.3-17.3 cM | View Comparative Map | |||
|
||||||||
| JRGP RFLP 2000 | BNL6.32 | 6 | 10.7-10.7 cM | View Comparative Map | ||||
|
||||||||
| TTU CTIR 2000 | BNL6.32 | 6 | 8-8 cM | View Comparative Map | ||||
|
||||||||
| QTL | Aberdeen Bala/Azu QTL 2002 | BNL6.32 | 6a | 2.4-2.4 cM | View Comparative Map | |||
|
||||||||
| CNRRI XeiB/Mil46 RI QTL 2002 | BNL6.32 | 6 | 18.6-18.6 cM | View Comparative Map | ||||
|
||||||||
| CNRRI Zh97B/Mil46 RI QTL 2002 | BNL6.32 | 6 | 38.3-38.3 cM | View Comparative Map | ||||
|
||||||||
| CTIR CT9993/IR6226 QTL 2000 | BNL6.32 | 6 | 8-8 cM | View Comparative Map | ||||
|
||||||||
| IGCAS ZYQ8/JX17 DH QTL 2000 | BNL6.32 | 6 | 10-10 cM | View Comparative Map | ||||
|
||||||||
| IGCN ZYQ18/JX17 DH QTL 1998 | BNL6.32 | 6 | 17.3-17.3 cM | View Comparative Map | ||||
|
||||||||
| IRRI IR622/IR600 QTL 2003 | BNL6.32 | 6 | 0-0 cM | View Comparative Map | ||||
|
||||||||
| IRRI Lem/Teq RI QTL 2001 | BNL6.32 | 6 | 22.2-22.2 cM | View Comparative Map | ||||
|
||||||||
| IRRI Mor/CO39 QTL 1994 | BNL6.32 | 6 | 2.3-2.3 cM | View Comparative Map | ||||
|
||||||||
| IRRI Pal/IR42 F2 QTL 1995 | BNL6.32 | 6a | 11.2-11.2 cM | View Comparative Map | ||||
|
||||||||
| JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 6 | 10.7-10.7 cM | View Comparative Map | ||||
|
||||||||
| MU CT9993/IR6226 QTL 2004 | BNL6.32 | 6 | 8-8 cM | View Comparative Map | ||||
|
||||||||
| TNCGEB CT9993/IR6226 QTL 2004 | BNL6.32 | 6 | 7.6-7.6 cM | View Comparative Map | ||||
|
||||||||
| TTU IR64/Orufi RI QTL 2003 | BNL6.32 | 6 | 0-0 cM | View Comparative Map | ||||
|
||||||||
| UCD Lab/Bla QTL 1998 | BNL6.32 | 6 | 169-169 cM | View Comparative Map | ||||
|
||||||||
| UKUW Bala/Azu QTL 1997 | BNL6.32 | 6 | 0-0 cM | View Comparative Map | ||||
|
||||||||
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell Diploid 1995 | BNL6.32 | D | 0-0 cM | View Comparative Map | |||
|
||||||||
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Paterson 2003 | BNL6.32 | I | 78.5-78.5 cM | View Comparative Map | |||
|
||||||||
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell Wilson 1999 | BNL6.32 | 9 | 46-46 cM | View Comparative Map | |||
|
||||||||
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell RFLP 1994 | BNL6.32 | 6 | 10.2-10.2 cM | View Comparative Map | |||
|
||||||||
| Cornell RFLP 2001 | BNL6.32 | 6 | 20-20 cM | View Comparative Map | ||||
|
||||||||
Associations (73)
Associated Ontologies (0)
Images (0)
