ID | 4774 | ||||
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Name | RZ508 (GRAINGENES PROBE) | ||||
Synonyms (4) |
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Deprecated Gramene Marker Acc | 48585428 | ||||
Type | RFLP | ||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||
Germplasm | |||||
Description | |||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RZ508 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | seedling leaf |
Source Treatment | etiolated |
Vector | pBluescript SK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0.8 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0135 |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 6 | 30,945,227-30,945,466 bp | View Comparative Map | |||
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BNL6.32 | Chr. 6 | 30,945,487-30,945,628 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | JRGP RFLP 2000 | BNL6.32 | 6 | 124.4-124.4 cM | View Comparative Map | |||
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KRGRP 1998 | BNL6.32 | 6 | 131.3-131.3 cM | View Comparative Map | ||||
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QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 6 | 193.2-193.2 cM | View Comparative Map | |||
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CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 6 | 246-246 cM | View Comparative Map | ||||
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CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 6 | 246-246 cM | View Comparative Map | ||||
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Cornell Jef/Oruf BC QTL 2003 | BNL6.32 | 6 | 127.2-127.2 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 6 | 79.5-79.5 cM | View Comparative Map | ||||
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IRRI Lem/Teq RI QTL 2001 | BNL6.32 | 6 | 234.3-234.3 cM | View Comparative Map | ||||
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JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 6 | 124.4-124.4 cM | View Comparative Map | ||||
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KRGRP Mil23/Gih QTL 1998 | BNL6.32 | 6 | 131.3-131.3 cM | View Comparative Map | ||||
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UCD Lab/Bla QTL 1998 | BNL6.32 | 6 | 0-0 cM | View Comparative Map | ||||
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Zhejian IR1552/Azu RI QTL 2001 | BNL6.32 | 6 | 193.2-193.2 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | D | 94.5-94.5 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Composite 2004 | BNL6.32 | 7B | 110-110 cM | View Comparative Map | |||
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Cornell Synthetic/Opata 1995 | BNL6.32 | 7B | 114.1-114.1 cM | View Comparative Map | ||||
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QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 7B | 114.1-114.1 cM | View Comparative Map | |||
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Wheat composite QTL 2004 | BNL6.32 | 7B | 110-110 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Paterson 2003 | BNL6.32 | I | 0-0 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 5 | 116.2-116.2 cM | View Comparative Map | |||
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Physical | AGI FPC Oct 2004 | BNL6.32 | ctg215 | 249-265 bands | View Comparative Map | |||
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Curated AGI FPC Oct 2004 | BNL6.32 | ctg215.5 | 249-265 bands | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 6 | 139.7-139.7 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 6 | 115.6-115.6 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQAQ004 | qtl_marker |
Oryza sativa | QTL | AQAQ013 | qtl_marker |
Oryza sativa | QTL | AQAQ021 | qtl_marker |
Oryza sativa | QTL | AQCU041 | qtl_marker |
Oryza sativa | QTL | AQCU107 | qtl_marker |
Oryza sativa | QTL | AQCU243 | qtl_marker |
Oryza sativa | QTL | AQEL020 | qtl_marker |
Oryza sativa | QTL | AQFW114 | qtl_marker |
Oryza sativa | QTL | AQFW154 | qtl_marker |
Oryza sativa | QTL | AQFW177 | qtl_marker |
Oryza sativa | QTL | AQFW224 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 5.03 | bin_marker |
Oryza sativa | QTL | CQE47 | qtl_marker |
Oryza sativa | QTL | CQS13 | qtl_marker |
Oryza sativa | Probed Site | rz508 | maizegdb_to_gramene |
Oryza sativa Indica Group | EST | AA231790 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231790 | related_sequence |
Oryza sativa Indica Group | EST | AA231899 | related_sequence |
RZ508 SL Autorad: Survey blot of the probe RZ508 for the BS125/2/BS125/WLO2 population |