ID | 4693 | ||||||||
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Name | RZ387 (GRAINGENES PROBE) | ||||||||
Synonyms (7) |
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Deprecated Gramene Marker Acc | 48583537 | ||||||||
Type | RFLP | ||||||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||||||
Germplasm | |||||||||
Description | |||||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RZ387 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | seedling leaf |
Source Treatment | etiolated |
Vector | pBluescript SK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.1 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0138 |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 7 | 2,081,175-2,081,729 bp | View Comparative Map | |||
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BNL6.32 | Chr. 7 | 2,082,182-2,082,366 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | Cornell V20A/glab QTL 2004 | BNL6.32 | 7 | 0-0 cM | View Comparative Map | |||
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Cornell V20A/Oruf QTL 1998 | BNL6.32 | 7 | 7.1-7.1 cM | View Comparative Map | ||||
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IRRI IR622/IR600 QTL 2003 | BNL6.32 | 7 | 132.1-132.1 cM | View Comparative Map | ||||
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JNIG W1944/Peik QTL 2002 | BNL6.32 | 7 | 25-25 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | B | 56.5-56.5 cM | View Comparative Map | |||
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BNL6.32 | B | 86-86 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Paterson 2003 | BNL6.32 | B | 97.7-97.7 cM | View Comparative Map | |||
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BNL6.32 | D | 20-20 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 2 | 28.6-28.6 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 7 | 25.2-25.2 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 7 | 0-0 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQF048 | qtl_marker |
Oryza sativa | QTL | AQF068 | qtl_marker |
Oryza sativa | QTL | AQF079 | qtl_marker |
Oryza sativa | QTL | AQFA017 | qtl_marker |
Oryza sativa | QTL | AQFA020 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 10.06 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 2.02 | bin_marker |
Oryza sativa | QTL | CQAH33 | qtl_marker |
Oryza sativa | Probed Site | rz387a | maizegdb_to_gramene |
Oryza sativa | Probed Site | rz387b | maizegdb_to_gramene |
Oryza sativa Indica Group | EST | AA231750 | related_sequence |
Oryza sativa Indica Group | EST | AA231749 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231750 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231749 | related_sequence |
RZ387 SL Autorad: Survey blot of the probe RZ387 for the BS125/2/BS125/WLO2 population |