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Oryza sativa RFLP "RZ574"
| ID | 4637 | ||||||
|---|---|---|---|---|---|---|---|
| Name | RZ574 (GRAINGENES PROBE) | ||||||
| Synonyms (6) |
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| Deprecated Gramene Marker Acc | 48582782 | ||||||
| MAIZEGDB PROBE | p-rz574 | ||||||
| Type | RFLP | ||||||
| Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||||
| Germplasm | |||||||
| Description | |||||||
| Tags () | None |
Source/Library
Details
| Marker Created: | |
|---|---|
| Marker Updated: | |
| Internal Marker Accession: | RZ574 |
| DNA Treatment | |
| Source Type | cDNA |
| Source Tissue | seedling leaf |
| Source Treatment | etiolated |
| Vector | pBluescript SK |
| Vector Antibiotic Resistance | Ampicillin |
| Fragment Size | 1.5 |
| Vector Excision Enzyme | EcoRI |
| Vector Primers | M13 forward/M13 reverse |
| Overgo1 | |
| Overgo2 |
Database Cross-References (3)
| Gramene Literature | Causse-M-A, Fulton-T-M, Cho-Y-G, Ahn-S-N, Chunwongse-J, Wu-K, Xiao-J, Yu-Z, Ronald-P-C, Harrington-S-E, Second-G, McCouch-S-R, Tanksley-S-D, "Saturated molecular map of the rice genome based on an interspecific backcross population", Genetics, 1994, vol. 138, pp. 1251-1274 |
|---|---|
| Gramene Diversity Rice Marker | 285 |
| Gramene Diversity Rice Marker | 1412 |
Sequences (4)
Related Sequences (4)
Align All Sequences
Map Positions (20)
| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 3 | 10,599,177-10,599,382 bp | View Comparative Map | |||
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| BNL6.32 | Chr. 3 | 10,600,153-10,600,443 bp | View Comparative Map | |||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell SSR 2001 | BNL6.32 | 3 | 85.1-85.1 cM | View Comparative Map | |||
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| QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 3 | 107.6-107.6 cM | View Comparative Map | |||
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| CNZU IR1552/Azu RI QTL 2003 | BNL6.32 | 3 | 192.4-192.4 cM | View Comparative Map | ||||
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| CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 3 | 192.4-192.4 cM | View Comparative Map | ||||
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| Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 3 | 85.1-85.1 cM | View Comparative Map | ||||
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| IRRI IR64/Azu DH QTL 2003 | BNL6.32 | 3 | 51.3-51.3 cM | View Comparative Map | ||||
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| Zejiang IR64/Azu DH QTL 2001 | BNL6.32 | 3 | 94.3-94.3 cM | View Comparative Map | ||||
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| Zhejian IR1552/Azu RI QTL 2001 | BNL6.32 | 3 | 138.7-138.7 cM | View Comparative Map | ||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell Diploid 1995 | BNL6.32 | A | 112.2-112.2 cM | View Comparative Map | |||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Composite 2004 | BNL6.32 | 4A | 36-36 cM | View Comparative Map | |||
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| Cornell Synthetic/Opata 1995 | BNL6.32 | 4A | 20.1-20.1 cM | View Comparative Map | ||||
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| QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 4A | 20.1-20.1 cM | View Comparative Map | |||
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| Wheat composite QTL 2004 | BNL6.32 | 4A | 36-36 cM | View Comparative Map | ||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell Wilson 1999 | BNL6.32 | 1 | 60.6-60.6 cM | View Comparative Map | |||
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| IBM 2002 | BNL6.32 | 9 | 359.2-359.2 cM | View Comparative Map | ||||
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| UMC 1998 | BNL6.32 | 9 | 104.4-104.4 cM | View Comparative Map | ||||
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| Map Type | Map Set | Name | Map | Position | Ext. Links | |||
|---|---|---|---|---|---|---|---|---|
| Genetic | Cornell RFLP 1994 | BNL6.32 | 3 | 19.8-19.8 cM | View Comparative Map | |||
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| Cornell RFLP 2001 | BNL6.32 | 3 | 21.6-21.6 cM | View Comparative Map | ||||
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Associations (83)
Associated Ontologies (0)
Images (2)
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RZ574 BROWS Autorad: Survey blot of the probe RZ574 for the comparative barley/rice/oat/wheat/sugarcane project |
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RZ574 SL Autorad: Survey blot of the probe RZ574 for the BS125/2/BS125/WLO2 population |
