ID | 4635 | ||||||||||
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Name | RZ244 (GRAINGENES PROBE) | ||||||||||
Synonyms (10) |
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Deprecated Gramene Marker Acc | 48584258 | ||||||||||
MAIZEGDB PROBE | p-rz244 | ||||||||||
Type | RFLP | ||||||||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||||||||
Germplasm | |||||||||||
Description | |||||||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RZ244 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | seedling leaf |
Source Treatment | etiolated |
Vector | pBluescript SK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0.9 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0142 |
Overgo2 | SOG00490ARZ244 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 12,654,094-12,654,377 bp | View Comparative Map | |||
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BNL6.32 | Chr. 1 | 12,654,505-12,654,751 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 1 | 105.9-105.9 cM | View Comparative Map | |||
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Cornell V20A/glab QTL 2004 | BNL6.32 | 5 | 37.2-37.2 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | Minnesota John/Dor F2 QTL 2000 | BNL6.32 | 1b | 157-157 cM | View Comparative Map | |||
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BNL6.32 | 5 | 55-55 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Diploid 1995 | BNL6.32 | A | 41.1-41.1 cM | View Comparative Map | |||
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BNL6.32 | C | 40.1-40.1 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Composite 2004 | BNL6.32 | 1A | 47-47 cM | View Comparative Map | |||
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Cornell Synthetic/Opata 1995 | BNL6.32 | 1A | 48.7-48.7 cM | View Comparative Map | ||||
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QTL | Synthetic/Opata RI RFLP/SSR QTL 1995 | BNL6.32 | 1A | 48.7-48.7 cM | View Comparative Map | |||
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Wheat composite QTL 2004 | BNL6.32 | 1A | 47-47 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Klein 2004 | BNL6.32 | LG-03 | 79.5-79.5 cM | View Comparative Map | |||
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Mace 2009 | BNL6.32 | 3 | 55.9-56.6 cM | View Comparative Map | ||||
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Paterson 2003 | BNL6.32 | A | 59.3-59.3 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | BNL 1996 | BNL6.32 | 3 | 69.8-69.8 cM | View Comparative Map | |||
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Cornell Wilson 1999 | BNL6.32 | 3 | 45.4-45.4 cM | View Comparative Map | ||||
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BNL6.32 | 8 | 76.9-76.9 cM | View Comparative Map | |||||
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IBM 2002 | BNL6.32 | 3 | 219.9-219.9 cM | View Comparative Map | ||||
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BNL6.32 | 8 | 201.6-201.6 cM | View Comparative Map | |||||
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SSR IBM 2001 | BNL6.32 | 3 | 193.8-193.8 cM | View Comparative Map | ||||
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BNL6.32 | 8 | 147.9-147.9 cM | View Comparative Map | |||||
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UMC 1998 | BNL6.32 | 3 | 61.3-61.3 cM | View Comparative Map | ||||
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BNL6.32 | 8 | 54.4-54.4 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 5 | 35.1-35.1 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 5 | 36.2-36.2 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Zizania palustris | QTL | AQK009 | qtl_marker |
Zizania palustris | QTL | AQK015 | qtl_marker |
Zizania palustris | QTL | AQK021 | qtl_marker |
Zizania palustris | QTL | AQK023 | qtl_marker |
Zizania palustris | QTL | AQK035 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 3.04 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 8.03 | bin_marker |
Oryza sativa | Probed Site | rz244a(dia) | maizegdb_to_gramene |
Oryza sativa | Probed Site | rz244b(dia) | maizegdb_to_gramene |
Oryza sativa Indica Group | EST | AA231739 | related_sequence |
Oryza sativa Indica Group | EST | AA231738 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231739 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231738 | related_sequence |
RZ244 BROWS Autorad: Survey blot of the probe RZ244 for the comparative barley/rice/oat/wheat/sugarcane project |