ID | 45300 |
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Name | AQEZ005 (QTL ACCESSION ) |
Synonyms (1) | AQEZ005-ALSN |
TO TERM | TO:0000354 (aluminum sensitivity) |
Trait Name | aluminum sensitivity |
Trait Symbol | ALSN |
Type | QTL |
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] |
Germplasm | |
Description | Stress root length after two week Al treatment was measured to evaluate aluminum sensitivity and used for QTL analysis. Four Al induced ESTs located in this region were screened by reverse Northern analysis and confirmed by Northern analysis. Two transcript-derived fragments (TDFs) regulated by Al stress, OsAR28 and OsAR16, were respectively mapped on the interval of this QTL. |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | AQEZ005 |
Chromosome | 1 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 40,343,585-40,567,354 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
QTL | CNZU IR1552/Azu RI QTL 2004 | BNL6.32 | 1 | 230.5-237.8 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | RFLP | RG323 | qtl_marker |
Oryza sativa | RFLP | RZ801 | qtl_marker |
Oryza sativa | RFLP | RG381 | qtl_marker |
Oryza sativa | RFLP | RG222 | qtl_marker |
Term Type | Term Name | Term Accession | |
---|---|---|---|
Growth Stage | rice plant growth stage | GRO:0007001 | Search |
Plant Structure | whole plant | PO:0000003 | Search |
Plant Growth and Development Stage | whole plant development stage | PO:0007033 | Search |
Plant Structure | plant structure | PO:0009011 | Search |
Plant Growth and Development Stage | plant structure development stage | PO:0009012 | Search |
Environment | aluminum nutrient regimen | EO:0007306 | Search |
Trait | aluminum sensitivity | TO:0000354 | Search |
Taxonomy | Oryza sativa | GR_tax:013681 | Search |