ID | 17694 | ||||
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Name | RZ588 | ||||
Synonyms (4) |
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Deprecated Gramene Marker Acc | 48585931 | ||||
Type | RFLP | ||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||
Germplasm | |||||
Description | |||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RZ588 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | seedling leaf |
Source Treatment | etiolated |
Vector | pBluescript SK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.1 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0493 |
Overgo2 |
Gramene Literature | Causse-M-A, Fulton-T-M, Cho-Y-G, Ahn-S-N, Chunwongse-J, Wu-K, Xiao-J, Yu-Z, Ronald-P-C, Harrington-S-E, Second-G, McCouch-S-R, Tanksley-S-D, "Saturated molecular map of the rice genome based on an interspecific backcross population", Genetics, 1994, vol. 138, pp. 1251-1274 |
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Gramene Diversity Rice Marker | 292 |
Gramene Diversity Rice Marker | 1273 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 6 | 4,896,250-4,896,481 bp | View Comparative Map | |||
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BNL6.32 | Chr. 6 | 4,897,048-4,897,779 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Paterson 2003 | BNL6.32 | I | 60-60 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 6 | 58.8-58.8 cM | View Comparative Map | |||
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BNL6.32 | 9 | 29.6-29.6 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 6 | 28.3-28.3 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 6 | 36.2-36.2 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Huazhong RFLP 1997 | BNL6.32 | 6 | 35.2-35.2 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQAB006 | qtl_marker |
Oryza sativa | QTL | AQAB023 | qtl_marker |
Oryza sativa | QTL | AQAB032 | qtl_marker |
Oryza sativa | QTL | AQAG013 | qtl_marker |
Oryza sativa | QTL | AQAI022 | qtl_marker |
Oryza sativa | QTL | AQAI066 | qtl_marker |
Oryza sativa | QTL | AQAK007 | qtl_marker |
Oryza sativa | QTL | AQAK019 | qtl_marker |
Oryza sativa | QTL | AQCF008 | qtl_marker |
Oryza sativa | QTL | AQCF009 | qtl_marker |
Oryza sativa | QTL | AQCF010 | qtl_marker |
Oryza sativa | QTL | AQCF019 | qtl_marker |
Oryza sativa | QTL | AQCF020 | qtl_marker |
Oryza sativa | QTL | AQCF021 | qtl_marker |
Oryza sativa | QTL | AQCF036 | qtl_marker |
Oryza sativa | QTL | AQCF037 | qtl_marker |
Oryza sativa | QTL | AQCF038 | qtl_marker |
Oryza sativa | QTL | AQCF039 | qtl_marker |
Oryza sativa | QTL | AQCF040 | qtl_marker |
Oryza sativa | QTL | AQCQ017 | qtl_marker |
Oryza sativa | QTL | AQCQ033 | qtl_marker |
Oryza sativa | QTL | AQCY006 | qtl_marker |
Oryza sativa | QTL | AQCY057 | qtl_marker |
Oryza sativa | QTL | AQCY083 | qtl_marker |
Oryza sativa | QTL | AQCY098 | qtl_marker |
Oryza sativa | QTL | AQCY118 | qtl_marker |
Oryza sativa | QTL | AQEJ085 | qtl_marker |
Oryza sativa | QTL | AQEL020 | qtl_marker |
Oryza sativa | QTL | AQF013 | qtl_marker |
Oryza sativa | QTL | AQF014 | qtl_marker |
Oryza sativa | QTL | AQF021 | qtl_marker |
Oryza sativa | QTL | AQF030 | qtl_marker |
Oryza sativa | QTL | AQF046 | qtl_marker |
Oryza sativa | QTL | AQF066 | qtl_marker |
Oryza sativa | QTL | AQF077 | qtl_marker |
Oryza sativa | QTL | AQF112 | qtl_marker |
Oryza sativa | QTL | AQF113 | qtl_marker |
Oryza sativa | QTL | AQF125 | qtl_marker |
Oryza sativa | QTL | AQF141 | qtl_marker |
Oryza sativa | QTL | AQGI144 | qtl_marker |
Oryza sativa | QTL | AQGI265 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 6.04 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 9.01 | bin_marker |
Oryza sativa | QTL | CQAF3 | qtl_marker |
Oryza sativa | QTL | CQAF5 | qtl_marker |
Oryza sativa | QTL | CQAH25 | qtl_marker |
Oryza sativa | QTL | CQAH26 | qtl_marker |
Oryza sativa | QTL | CQAH27 | qtl_marker |
Oryza sativa | QTL | CQAH28 | qtl_marker |
Oryza sativa | QTL | CQAH29 | qtl_marker |
Oryza sativa | QTL | CQAH30 | qtl_marker |
Oryza sativa | QTL | CQAJ21 | qtl_marker |
Oryza sativa | QTL | CQAL10 | qtl_marker |
Oryza sativa | QTL | CQS13 | qtl_marker |
Oryza sativa | Probed Site | rz588a | maizegdb_to_gramene |
Oryza sativa | Probed Site | rz588b | maizegdb_to_gramene |
Oryza sativa Indica Group | EST | AA231816 | related_sequence |
Oryza sativa Indica Group | EST | AA231815 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231816 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231815 | related_sequence |
RZ588 BROWS Autorad: Survey blot of the probe RZ588 for the comparative barley/rice/oat/wheat/sugarcane project | |
RZ588 SL Autorad: Survey blot of the probe RZ588 for the BS125/2/BS125/WLO2 population |