ID | 17667 | ||||||
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Name | RZ53 | ||||||
Synonyms (5) |
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Deprecated Gramene Marker Acc | 48584750 | ||||||
Type | RFLP | ||||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||||
Germplasm | |||||||
Description | |||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RZ53 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | seedling leaf |
Source Treatment | etiolated |
Vector | pBluescript SK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 0.9 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG2304 |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 11 | 5,706,417-5,706,698 bp | View Comparative Map | |||
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BNL6.32 | Chr. 11 | 5,706,684-5,706,935 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 11 | 62.1-62.1 cM | View Comparative Map | |||
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Cornell V20A/glab QTL 2004 | BNL6.32 | 4 | 57.9-57.9 cM | View Comparative Map | ||||
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IRRI Lem/Teq RI QTL 2001 | BNL6.32 | 11 | 52.2-52.2 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | Minnesota John/Dor F2 QTL 2000 | BNL6.32 | 11 | 87-87 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Paterson 2003 | BNL6.32 | C | 46.2-46.2 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 4 | 49.3-49.3 cM | View Comparative Map | |||
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BNL6.32 | 5 | 69-69 cM | View Comparative Map | |||||
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IBM 2002 | BNL6.32 | 4 | 148.2-148.2 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 4 | 71.5-71.5 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 4 | 57-57 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQAP011 | qtl_marker |
Oryza sativa | QTL | AQAP012 | qtl_marker |
Oryza sativa | QTL | AQAP013 | qtl_marker |
Oryza sativa | QTL | AQAP034 | qtl_marker |
Oryza sativa | QTL | AQCU055 | qtl_marker |
Oryza sativa | QTL | AQCU179 | qtl_marker |
Oryza sativa | QTL | AQCU205 | qtl_marker |
Oryza sativa | QTL | AQCU229 | qtl_marker |
Oryza sativa | QTL | AQFW041 | qtl_marker |
Oryza sativa | QTL | AQFW142 | qtl_marker |
Oryza sativa | QTL | AQFW162 | qtl_marker |
Oryza sativa | QTL | AQFW172 | qtl_marker |
Oryza sativa | QTL | AQFW250 | qtl_marker |
Zizania palustris | QTL | AQK041 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 4.03 | bin_marker |
Zea mays subsp. mays | Maize Bin | Bin 5.01 | bin_marker |
Oryza sativa | Probed Site | rz53a | maizegdb_to_gramene |
Oryza sativa | Probed Site | rz53b | maizegdb_to_gramene |
Oryza sativa Indica Group | EST | AA231931 | related_sequence |
Oryza sativa Indica Group | EST | AA231852 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231931 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231852 | related_sequence |
RZ53 SL Autorad: Survey blot of the probe RZ53 for the BS125/2/BS125/WLO2 population |