ID | 16084 | ||||||||
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Name | C1454 | ||||||||
Synonyms (7) |
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Type | RFLP | ||||||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||||||
Germplasm | |||||||||
Description | |||||||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | C1454 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | callus |
Source Treatment | |
Vector | |
Vector Antibiotic Resistance | |
Fragment Size | |
Vector Excision Enzyme | SalI/NotI |
Vector Primers | |
Overgo1 | SOG1210 |
Overgo2 |
CGGACGGTGTTCCGNGACGCNTGGGCACAAAGGCACTAATCTACTGGCCTAATCTATCCAATCCAGGAGGCAACCCAANC
TGGTAATATATTGGNTCGGTGCTTGAGGTTGAGGGGGAAGCAAAGCACGATCGACCAGGAACCAGGCAGGCAGCCAAGGT
GAGGAAGGAGAAGAAGCTGAGAGCCTCTCCCTGCTTAGACGTCCCTNTGCAGCGGCCTGGGAGTTTCCCAGCCTGCTCTC
ACCTGGCTGGCTAGATCCAGCGGTCATCCCTTGCCACGAGGAATGGNCCTGTGGACGTTGCTGGAGGGCTTTTTGCTTCT
CGCAAATTNATTAGNGATACTAAATGA
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 9 | 9,629,362-9,630,362 bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | JRGP RFLP 2000 | BNL6.32 | 9 | 30.6-30.6 cM | View Comparative Map | |||
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QTL | CAU IRAT109/YUEFU QTL 2004 | BNL6.32 | 9 | 146.2-146.2 cM | View Comparative Map | |||
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CIRAD IR64/Azu DH QTL 2003 | BNL6.32 | 3 | 121.3-121.3 cM | View Comparative Map | ||||
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CNCAU Orufi/Gui2 BC1 QTL 2001 | BNL6.32 | 9 | 38.5-38.5 cM | View Comparative Map | ||||
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JKU Aso/IR24 QTL 1996 | BNL6.32 | 3 | 94.1-94.1 cM | View Comparative Map | ||||
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JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 9 | 30.6-30.6 cM | View Comparative Map | ||||
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NIAR Nip/Owar F4 QTL 2001 | BNL6.32 | 9 | 28.3-28.3 cM | View Comparative Map | ||||
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NIAS Kosh/Kas BIL QTL 2003 | BNL6.32 | 9 | 23-23 cM | View Comparative Map | ||||
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NIAS Sas/Hab BCIL QTL 2003 | BNL6.32 | 3 | 49-49 cM | View Comparative Map | ||||
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TKU Integrated QTL 2002 | BNL6.32 | 9 | 41.4-41.4 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Paterson 2003 | BNL6.32 | B | 46.2-46.2 cM | View Comparative Map | |||
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BNL6.32 | C | 76.9-76.9 cM | View Comparative Map | |||||
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BNL6.32 | C | 106.9-106.9 cM | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | JIC LGD1/ICMP 2004 | BNL6.32 | 7 | 69-69 cM | View Comparative Map | |||
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QTL | GUA LGD1/ICMP F2 RFLP QTL 2004 | BNL6.32 | 7 | 69-69 cM | View Comparative Map | |||
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Species | Type | Name | Assoc. Type |
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Oryza sativa | QTL | AQBG008 | qtl_marker |
Oryza sativa | QTL | AQCZ001 | qtl_marker |
Pennisetum glaucum | QTL | AQEW004 | qtl_marker |
Pennisetum glaucum | QTL | AQEW008 | qtl_marker |
Pennisetum glaucum | QTL | AQEW012 | qtl_marker |
Oryza sativa | QTL | AQU014 | qtl_marker |
Oryza sativa | QTL | AQU019 | qtl_marker |
Oryza sativa | QTL | AQU047 | qtl_marker |
Oryza sativa | QTL | CQAC3 | qtl_marker |
Oryza sativa Japonica Group | OVERGO | SOG1210 | related_probe |
Oryza sativa Japonica Group | EST | D15877 | related_sequence |