ID | 13789 | ||||
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Name | RZ413 | ||||
Synonyms (3) |
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Deprecated Gramene Marker Acc | 48586295 | ||||
Type | RFLP | ||||
Species | Oryza sativa (Oryza sativa) [ GR_tax:013681 ] | ||||
Germplasm | |||||
Description | |||||
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RZ413 |
DNA Treatment | |
Source Type | cDNA |
Source Tissue | seedling leaf |
Source Treatment | etiolated |
Vector | pBluescript SK |
Vector Antibiotic Resistance | Ampicillin |
Fragment Size | 1.6 |
Vector Excision Enzyme | EcoRI |
Vector Primers | M13 forward/M13 reverse |
Overgo1 | SOG0792 |
Overgo2 |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 17,946,707-17,946,968 bp | View Comparative Map | |||
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BNL6.32 | Chr. 1 | 17,947,821-17,949,631 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | JRGP RFLP 2000 | BNL6.32 | 1 | 73.4-73.4 cM | View Comparative Map | |||
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QTL | JRGP Nip/Kas F2 QTL 2000 | BNL6.32 | 1 | 73.4-73.4 cM | View Comparative Map | |||
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Sussex IR55178 QTL 2001 | BNL6.32 | 6 | 24.6-24.6 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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QTL | Minnesota John/Dor F2 QTL 2000 | BNL6.32 | 1b | 201-201 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Klein 2004 | BNL6.32 | LG-02 | 75.7-77.3 cM | View Comparative Map | |||
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Mace 2009 | BNL6.32 | 2 | 75.6-75.6 cM | View Comparative Map | ||||
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Paterson 2003 | BNL6.32 | B | 71.6-71.6 cM | View Comparative Map | ||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell Wilson 1999 | BNL6.32 | 7 | 51.6-51.6 cM | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | Cornell RFLP 1994 | BNL6.32 | 1 | 77.5-77.5 cM | View Comparative Map | |||
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Cornell RFLP 2001 | BNL6.32 | 1 | 56.8-56.8 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
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Zizania palustris | QTL | AQK006 | qtl_marker |
Zea mays subsp. mays | Maize Bin | Bin 7.02 | bin_marker |
Oryza sativa | QTL | CQI6 | qtl_marker |
Oryza sativa | QTL | CQI7 | qtl_marker |
Oryza sativa | QTL | CQI8 | qtl_marker |
Oryza sativa | QTL | CQN26 | qtl_marker |
Oryza sativa | QTL | CQN43 | qtl_marker |
Oryza sativa | QTL | CQN5 | qtl_marker |
Oryza sativa | QTL | CQN51 | qtl_marker |
Oryza sativa | Probed Site | rz413 | maizegdb_to_gramene |
Oryza sativa Indica Group | EST | AA231780 | related_sequence |
Oryza sativa Indica Group | EST | AA231779 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231780 | contained_in_sequence |
Oryza sativa Indica Group | EST | AA231779 | related_sequence |
RZ413 SL Autorad: Survey blot of the probe RZ413 for the BS125/2/BS125/WLO2 population |