ID | 10777 |
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Name | RM348 |
Synonyms (1) | M16 |
Type | SSR |
Species | Oryza sativa Indica Group (Oryza sativa indica) [ GR_tax:013682 ] |
Germplasm | |
Description | |
Tags () | None |
Marker Created: | |
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Marker Updated: | |
Internal Marker Accession: | RM348 |
Repeat Motif | (CAG)7 |
Anneal Temperature | 55 |
Expected PCR Product Size | 136 |
Sequence Source | |
Linkage Group | |
Remarks |
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 4 | 32,650,358-32,650,527 bp | View Comparative Map | |||
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BNL6.32 | Chr. 4 | 32,650,387-32,650,528 bp | View Comparative Map | |||||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | CIAT SSR 2006 | BNL6.32 | 4 | 160.8-160.8 cM | View Comparative Map | |||
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IRMI 2003 | BNL6.32 | 4 | 113.2-113.2 cM | View Comparative Map | ||||
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QTL | Aberdeen Bala/Azu QTL 2002 | BNL6.32 | 4 | 140.2-140.2 cM | View Comparative Map | |||
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CAU IRAT109/YUEFU QTL 2004 | BNL6.32 | 4 | 3.3-3.3 cM | View Comparative Map | ||||
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CNHZAU Zhe97/Wuy2 QTL 2004 | BNL6.32 | 4 | 118-118 cM | View Comparative Map | ||||
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CNYU Bal/Nan//Bal BC1 QTL 2001 | BNL6.32 | 4 | 48.9-48.9 cM | View Comparative Map | ||||
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Cornell IR64/Azu DH QTL 2001 | BNL6.32 | 3 | 13-13 cM | View Comparative Map | ||||
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IRRI RD23/Olong F2 QTL 2003 | BNL6.32 | 4 | 86.3-86.3 cM | View Comparative Map | ||||
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JUT Akihi/IRAT109 QTL 2004 | BNL6.32 | 4 | 122.24-122.24 cM | View Comparative Map | ||||
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JUT IR36/Genj QTL 2004 | BNL6.32 | 4 | 94.4-94.4 cM | View Comparative Map | ||||
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LSU Caiapo/IRGC103544 QTL 2004 | BNL6.32 | 4 | 8-8 cM | View Comparative Map | ||||
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M202/IR50 UCD QTL 2003 | BNL6.32 | 4 | 102.9-102.9 cM | View Comparative Map | ||||
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Species | Type | Name | Assoc. Type |
---|---|---|---|
Oryza sativa | QTL | AQDU001 | qtl_marker |
Oryza sativa | QTL | AQEI057 | qtl_marker |
Oryza sativa | QTL | AQEI058 | qtl_marker |
Oryza sativa | QTL | AQEI059 | qtl_marker |
Oryza sativa | QTL | AQEI121 | qtl_marker |
Oryza sativa | QTL | AQFJ070 | qtl_marker |
Oryza sativa | QTL | AQFQ003 | qtl_marker |
Oryza sativa | QTL | AQFU010 | qtl_marker |
Oryza sativa | QTL | AQGM018 | qtl_marker |
Oryza sativa | QTL | AQGP002 | qtl_marker |
Oryza sativa | QTL | AQGP062 | qtl_marker |
Oryza sativa | QTL | AQHE105 | qtl_marker |
Oryza sativa | QTL | AQO039 | qtl_marker |
Oryza sativa | QTL | AQO057 | qtl_marker |
Oryza sativa Japonica Group | SSR | AUT17555 | equivalent_to |
Oryza sativa | QTL | CQAA1 | qtl_marker |
Oryza sativa | QTL | CQAE2 | qtl_marker |
Oryza sativa Indica Group | Primer | RM348_forward | primer_forward |
Oryza sativa Indica Group | Primer | RM348_reverse | primer_reverse |