Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||
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Accession | GR:0080003 | ||||
Gene Symbol | FY | ||||
Gene Name | FY | ||||
Synonyms (3) |
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E.C. Numbers (0) | |||||
Pathway Reactions (0) | |||||
Chromosome No. | 1 | ||||
Gene Type | CDS (Protein coding) | ||||
Has Phenotype | no | ||||
Description | FY is a rice homolog of Arabidopsis FY (At5g13480). The predicted OsFY protein shares a conserved 7 WD-repeat and at lease two Pro-Pro-Leu-Pro motifs with Arabidopsis FY. Direct binding between OsFY and OsFCA-gamma was demonstrated by yeast two-hybrid system, it suggested that OsFY may also function in rice flowering-time control. |
Protein |
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Nucleotide (DNA) |
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 1 | 41,872,906-41,879,558bp | View Comparative Map | |||
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Genetic | JRGP RFLP 2000 | BNL6.32 | 1 | 167.2-169.5cM | View Comparative Map | |||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | JRGP RFLP 2000 | 1 | 167.2 cM | 169.5 cM | jrgp-rflp-2000-1_GR:0080003 |
2 | Rice japonica MSU6 | Chr. 1 | 41872906 bp | 41879558 bp | grjp2009a-1-GR:0080003 |
Trait | days to heading (TO:0000137), inflorescence development trait (TO:0000621) |
Plant Structure | root tip (PO:0000025), shoot apex (PO:0000037), plant embryo (PO:0009009) |
Plant Growth and Development Stage | sporophyte vegetative stage (PO:0007134) |
Cereal Plant Growth Stage | 1-4 leaf stage (GRO:0007142) |
Cellular Component | cell (GO:0005623) |
Molecular Function | molecular_function (GO:0003674) |
Biological Process | embryonic development via the syncytial blastoderm (GO:0001700), regulation of flower development (GO:0009909), mRNA 3'-end processing (GO:0031124) |
Environment | growth chamber study (EO:0007269), unknown environment (EO:0007403) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
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chr1 | 41,872,906 | 41,879,558 | ~160K SNPs x 20 accessions (McNally 2... | 13 | Search for SNPs |
chr1 | 41,872,906 | 41,879,558 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr1 | 41,872,906 | 41,879,558 | Huang X, et al, Nat Genetics 2010 Nov... | 29 | Search for SNPs |
chr1 | 41,872,906 | 41,879,558 | RiceDiversity 44K SNP assay, 34 trait... | 29 | Search for SNPs |
chr1 | 41,872,906 | 41,879,558 | RiceDiversity 44K SNP assay, 34 trait... | 1 | Search for SNPs |