Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||
---|---|---|---|---|---|
Accession | GR:0020063 | ||||
Gene Symbol | rr9 | ||||
Gene Name | rr9Type A response regulator 9 | ||||
Synonyms (3) |
|
||||
E.C. Numbers (0) | |||||
Pathway Reactions (0) | |||||
Chromosome No. | 12 | ||||
Gene Type | CDS (Protein coding) | ||||
Has Phenotype | no | ||||
Description | A member of the cytokinin-responsive type-A response regulator family. | ||||
Curator Comment | Type-A responsive regulators were identified in rice with the rational that they shared high similarity with the conserved D-D-K residues and short N- and C- terminal extensions found in Arabidopsis type-A responsive regulators. |
Protein |
|
||||||
---|---|---|---|---|---|---|---|
Nucleotide (DNA) |
|
Map Type | Map Set | Name | Map | Position | Ext. Links | |||
---|---|---|---|---|---|---|---|---|
Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 12 | 1,914,854-1,916,596bp | View Comparative Map | |||
|
Map Position [ View in Marker DB ] | |||||
---|---|---|---|---|---|
# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | Rice japonica MSU6 | Chr. 12 | 1914854 bp | 1916596 bp | grjp2009a-12-GR:0020063 |
Cellular Component | plastid (GO:0009536) |
Molecular Function | phosphorelay response regulator activity (GO:0000156) |
Biological Process | phosphorelay signal transduction system (GO:0000160), regulation of transcription, DNA-dependent (GO:0006355), response to cytokinin stimulus (GO:0009735) |
Environment | unknown environment (EO:0007403) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
---|---|---|---|---|---|
chr12 | 1,914,854 | 1,916,596 | ~160K SNPs x 20 accessions (McNally 2... | 0 | |
chr12 | 1,914,854 | 1,916,596 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr12 | 1,914,854 | 1,916,596 | B-Gross/J-Yulin SNP Pi-ta study in AA... | 0 | |
chr12 | 1,914,854 | 1,916,596 | Huang X, et al, Nat Genetics 2010 Nov... | 1 | Search for SNPs |
chr12 | 1,914,854 | 1,916,596 | RiceDiversity 44K SNP assay, 34 trait... | 1 | Search for SNPs |
chr12 | 1,914,854 | 1,916,596 | RiceDiversity 44K SNP assay, 34 trait... | 0 |