Species | Oryza sativa (Rice) [ GR_tax:013681 ] | ||||||
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Accession | GR:0020052 | ||||||
Gene Symbol | ckx3 | ||||||
Gene Name | Putative cytokinin oxidase 3 | ||||||
Synonyms (4) |
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E.C. Numbers (1) | 1.5.99.12 | ||||||
Pathway Reactions (6) |
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Chromosome No. | 10 | ||||||
Gene Type | CDS (Protein coding) | ||||||
Has Phenotype | no | ||||||
Description | Cytokinin oxidase/dehydrogenase enzymes (CKX) are reponsible for the majority of cytokinin catabolism. | ||||||
Curator Comment | Members of the CKX family are posttranslationally modifies by glycosylation. In addition, CKX members contain the cofactor FAD. |
Protein |
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Nucleotide (DNA) |
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Map Type | Map Set | Name | Map | Position | Ext. Links | |||
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Sequence | Gramene Annotated Nipponbare Sequence 2009 | BNL6.32 | Chr. 10 | 18,198,726-18,203,534bp | View Comparative Map | |||
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Map Position [ View in Marker DB ] | |||||
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# | Map Set Name | Linkage Group | Start Position | Stop Position | CMap Feature Acc |
1 | Rice japonica MSU6 | Chr. 10 | 18198726 bp | 18203534 bp | grjp2009a-10-GR:0020052 |
Cellular Component | cytoplasmic membrane-bounded vesicle (GO:0016023) |
Molecular Function | oxidoreductase activity (GO:0016491), cytokinin dehydrogenase activity (GO:0019139) |
Biological Process | electron transport chain (GO:0022900), secretion by cell (GO:0032940) |
Environment | tissue culture growth media (EO:0007266), unknown environment (EO:0007403) |
Chr | Start | Stop | Exp | Num. SNP Positions | |
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chr10 | 18,198,726 | 18,203,534 | ~160K SNPs x 20 accessions (McNally 2... | 6 | Search for SNPs |
chr10 | 18,198,726 | 18,203,534 | '1536 chip' - 1311 SNPs x 395 rice ac... | 0 | |
chr10 | 18,198,726 | 18,203,534 | Huang X, et al, Nat Genetics 2010 Nov... | 1 | Search for SNPs |
chr10 | 18,198,726 | 18,203,534 | RiceDiversity 44K SNP assay, 34 trait... | 1 | Search for SNPs |
chr10 | 18,198,726 | 18,203,534 | RiceDiversity 44K SNP assay, 34 trait... | 2 | Search for SNPs |