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**Eliminate Orphans - Remove comparison maps that don't have correspondences to a reference map.
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 Map Options
Map Set Oryza sativa-Class I SSR (IRGSP) 2005
(Reference Set)
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Correspondences
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Maps 4
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Highlight Features:
Feature Types:
Feature Ignore Display if
Correspondence		 Always Display
SSR
Other
 
Show Labels: None Landmarks All
Collapse Overlapping
Features:		 No Yes
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 Correspondence Options
 Correspondence Options
Include Correspondence Types:
Evidence Ignore Use Less Than
Score		 Greater Than
Score		 Score
IAGP
Marker Identity
ISS
Wheat EST Breakpoint Interval
Amplified segment
Maize bin marker
centromeric_marker
Clone end
Collinear block
Constituent clone
contained_in_sequence
EST cluster
hybridisation
maizegdb_to_gramene
Mapped contig to clone
mate_pair
qtl_marker
related_probe
related_sequence
Shared sequence
Shared synonym
Source sequence
Subclone
Synteny
Synteny block
 
Aggregate Correspondences: No 1 Line 2 Lines
Correspondence lines drawn to: Feature Map
View Intra-Slot Correspondences: No yes
Aggregate evidence types separately: No yes
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 Display Options
Map Size: tiny small medium large Custom
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Image Type: PNG JPEG GIF SVG *
Clean View (no navigation buttons): No Yes
Hide the Legend: No Yes
Size of Dot Plot Pixels: 1
*SVG output for high-resolution printing only (no hyperlinks).
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Draw Maps Using
Same Scale:		 No Yes
Clickable Image Use All Omit Features Omit All Buttons
Menu Order of Comparative Maps: Predefined
Order		 Number of
Correspondences
Ignore Image Map
Sanity Check:		 No Yes
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Map Details

Map Type: Sequence [ View Map Type Info ]
Map Set Name: Oryza sativa - Class I SSR (IRGSP) 2005 [ View Map Set Info ]
Map Name: 4
Map Start: 0 bp
Map Stop: 35,494,997 bp
Features by Type:
912 SSR
912 Total

Map Features

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Items 1 to 25 of 912.       of 37 | Next
Oryza sativa - Class I SSR (IRGSP) 2005 - 4
(Click headers to resort)		 Comparative Maps
Feature Type Position (bp) Map Feature Type Position Evidence Actions
RM16251 SSR 48,592 - 48,941 No other positions
RM16252 SSR 50,457 - 50,642 No other positions
RM16254 SSR 97,697 - 97,871 No other positions
RM16255 SSR 98,468 - 98,829 No other positions
RM16256 SSR 113,199 - 113,513 No other positions
RM16257 SSR 118,297 - 118,806 No other positions
RM16260 SSR 167,710 - 167,879 No other positions
RM16261 SSR 167,934 - 168,108 No other positions
RM16266 SSR 235,963 - 236,335 No other positions
RM16273 SSR 260,862 - 261,590 No other positions
RM16275 SSR 309,606 - 310,126 No other positions
RM16276 SSR 309,687 - 310,316 No other positions
RM16277 SSR 311,861 - 311,943 No other positions
RM16278 SSR 321,813 - 321,966 No other positions
RM16280 SSR 357,490 - 357,676 No other positions
RM16281 SSR 387,667 - 387,866 No other positions
RM16282 SSR 403,989 - 404,142 No other positions
RM16284 SSR 514,986 - 515,277 No other positions
RM16285 SSR 543,206 - 543,306 No other positions
RM16294 SSR 911,630 - 912,017 No other positions
RM16295 SSR 911,630 - 912,017 No other positions
RM16296 SSR 913,755 - 913,998 No other positions
RM16300 SSR 970,789 - 971,320 No other positions
RM16301 SSR 987,251 - 987,431 No other positions
RM16302 SSR 997,028 - 997,225 No other positions